Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx6-1Q99MA9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx6-1Q99MA9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.84■□□□□ 0.77
Nkx6-1Q99MA9 Gm5874-201ENSMUST00000096101 508 ntBASIC19.84■□□□□ 0.77
Nkx6-1Q99MA9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
Nkx6-1Q99MA9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nkx6-1Q99MA9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx6-1Q99MA9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx6-1Q99MA9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nkx6-1Q99MA9 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.83■□□□□ 0.77
Nkx6-1Q99MA9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nkx6-1Q99MA9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx6-1Q99MA9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nkx6-1Q99MA9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nkx6-1Q99MA9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.82■□□□□ 0.76
Nkx6-1Q99MA9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx6-1Q99MA9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-1Q99MA9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-1Q99MA9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Nkx6-1Q99MA9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-1Q99MA9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-1Q99MA9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Nkx6-1Q99MA9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-1Q99MA9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-1Q99MA9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx6-1Q99MA9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx6-1Q99MA9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.8■□□□□ 0.76
Nkx6-1Q99MA9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.8■□□□□ 0.76
Nkx6-1Q99MA9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx6-1Q99MA9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Nkx6-1Q99MA9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx6-1Q99MA9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-1Q99MA9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-1Q99MA9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.79■□□□□ 0.76
Nkx6-1Q99MA9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-1Q99MA9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx6-1Q99MA9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.79■□□□□ 0.76
Nkx6-1Q99MA9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nkx6-1Q99MA9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx6-1Q99MA9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx6-1Q99MA9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nkx6-1Q99MA9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx6-1Q99MA9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.78■□□□□ 0.76
Nkx6-1Q99MA9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx6-1Q99MA9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx6-1Q99MA9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx6-1Q99MA9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx6-1Q99MA9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Nkx6-1Q99MA9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx6-1Q99MA9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx6-1Q99MA9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.77■□□□□ 0.76
Nkx6-1Q99MA9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.77■□□□□ 0.76
Nkx6-1Q99MA9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx6-1Q99MA9 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.77■□□□□ 0.76
Nkx6-1Q99MA9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx6-1Q99MA9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx6-1Q99MA9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nkx6-1Q99MA9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nkx6-1Q99MA9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nkx6-1Q99MA9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.76■□□□□ 0.75
Nkx6-1Q99MA9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.76■□□□□ 0.75
Nkx6-1Q99MA9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nkx6-1Q99MA9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx6-1Q99MA9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx6-1Q99MA9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx6-1Q99MA9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx6-1Q99MA9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx6-1Q99MA9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx6-1Q99MA9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nkx6-1Q99MA9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nkx6-1Q99MA9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.74■□□□□ 0.75
Nkx6-1Q99MA9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-1Q99MA9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-1Q99MA9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-1Q99MA9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx6-1Q99MA9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx6-1Q99MA9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx6-1Q99MA9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx6-1Q99MA9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.73■□□□□ 0.75
Nkx6-1Q99MA9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx6-1Q99MA9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx6-1Q99MA9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx6-1Q99MA9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx6-1Q99MA9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx6-1Q99MA9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx6-1Q99MA9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx6-1Q99MA9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx6-1Q99MA9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx6-1Q99MA9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms