Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.7■■□□□ 1.54
Pcdhb22Q91XZ8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhb22Q91XZ8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhb22Q91XZ8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Pcdhb22Q91XZ8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Pcdhb22Q91XZ8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb22Q91XZ8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb22Q91XZ8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb22Q91XZ8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb22Q91XZ8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb22Q91XZ8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb22Q91XZ8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb22Q91XZ8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
Pcdhb22Q91XZ8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb22Q91XZ8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb22Q91XZ8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb22Q91XZ8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.68■■□□□ 1.54
Pcdhb22Q91XZ8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.67■■□□□ 1.54
Pcdhb22Q91XZ8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Pcdhb22Q91XZ8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.67■■□□□ 1.54
Pcdhb22Q91XZ8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb22Q91XZ8 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.67■■□□□ 1.54
Pcdhb22Q91XZ8 Gm10399-202ENSMUST00000202768 748 ntBASIC24.67■■□□□ 1.54
Pcdhb22Q91XZ8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.67■■□□□ 1.54
Pcdhb22Q91XZ8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.67■■□□□ 1.54
Pcdhb22Q91XZ8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb22Q91XZ8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb22Q91XZ8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb22Q91XZ8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb22Q91XZ8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb22Q91XZ8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb22Q91XZ8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb22Q91XZ8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Pcdhb22Q91XZ8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb22Q91XZ8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb22Q91XZ8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhb22Q91XZ8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
Pcdhb22Q91XZ8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhb22Q91XZ8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.64■■□□□ 1.54
Pcdhb22Q91XZ8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhb22Q91XZ8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb22Q91XZ8 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.63■■□□□ 1.53
Pcdhb22Q91XZ8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb22Q91XZ8 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.62■■□□□ 1.53
Pcdhb22Q91XZ8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb22Q91XZ8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb22Q91XZ8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb22Q91XZ8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb22Q91XZ8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb22Q91XZ8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.62■■□□□ 1.53
Pcdhb22Q91XZ8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb22Q91XZ8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.62■■□□□ 1.53
Pcdhb22Q91XZ8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb22Q91XZ8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.61■■□□□ 1.53
Pcdhb22Q91XZ8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb22Q91XZ8 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.61■■□□□ 1.53
Pcdhb22Q91XZ8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb22Q91XZ8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb22Q91XZ8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
Pcdhb22Q91XZ8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb22Q91XZ8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb22Q91XZ8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb22Q91XZ8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb22Q91XZ8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb22Q91XZ8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb22Q91XZ8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb22Q91XZ8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.59■■□□□ 1.53
Pcdhb22Q91XZ8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb22Q91XZ8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb22Q91XZ8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb22Q91XZ8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.59■■□□□ 1.53
Pcdhb22Q91XZ8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb22Q91XZ8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Pcdhb22Q91XZ8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb22Q91XZ8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb22Q91XZ8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdhb22Q91XZ8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Pcdhb22Q91XZ8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb22Q91XZ8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Pcdhb22Q91XZ8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb22Q91XZ8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb22Q91XZ8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb22Q91XZ8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb22Q91XZ8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.56■■□□□ 1.52
Pcdhb22Q91XZ8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb22Q91XZ8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb22Q91XZ8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb22Q91XZ8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb22Q91XZ8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb22Q91XZ8 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.56■■□□□ 1.52
Pcdhb22Q91XZ8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Pcdhb22Q91XZ8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.55■■□□□ 1.52
Pcdhb22Q91XZ8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.55■■□□□ 1.52
Pcdhb22Q91XZ8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb22Q91XZ8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Pcdhb22Q91XZ8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.55■■□□□ 1.52
Pcdhb22Q91XZ8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb22Q91XZ8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb22Q91XZ8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Pcdhb22Q91XZ8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms