Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhb5Q91XZ5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb5Q91XZ5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb5Q91XZ5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb5Q91XZ5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb5Q91XZ5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb5Q91XZ5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb5Q91XZ5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhb5Q91XZ5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhb5Q91XZ5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Pcdhb5Q91XZ5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhb5Q91XZ5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhb5Q91XZ5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhb5Q91XZ5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Pcdhb5Q91XZ5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhb5Q91XZ5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb5Q91XZ5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb5Q91XZ5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Pcdhb5Q91XZ5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb5Q91XZ5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC24.97■■□□□ 1.59
Pcdhb5Q91XZ5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb5Q91XZ5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb5Q91XZ5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb5Q91XZ5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb5Q91XZ5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb5Q91XZ5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.96■■□□□ 1.59
Pcdhb5Q91XZ5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb5Q91XZ5 Gm9870-201ENSMUST00000063874 645 ntBASIC24.96■■□□□ 1.59
Pcdhb5Q91XZ5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Pcdhb5Q91XZ5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Pcdhb5Q91XZ5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.59
Pcdhb5Q91XZ5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Pcdhb5Q91XZ5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhb5Q91XZ5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhb5Q91XZ5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.95■■□□□ 1.58
Pcdhb5Q91XZ5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhb5Q91XZ5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Pcdhb5Q91XZ5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Pcdhb5Q91XZ5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb5Q91XZ5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb5Q91XZ5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb5Q91XZ5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb5Q91XZ5 Gm9207-201ENSMUST00000198773 1115 ntBASIC24.94■■□□□ 1.58
Pcdhb5Q91XZ5 Serp2-204ENSMUST00000228055 705 ntBASIC24.94■■□□□ 1.58
Pcdhb5Q91XZ5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb5Q91XZ5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.94■■□□□ 1.58
Pcdhb5Q91XZ5 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.94■■□□□ 1.58
Pcdhb5Q91XZ5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC24.94■■□□□ 1.58
Pcdhb5Q91XZ5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb5Q91XZ5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24.93■■□□□ 1.58
Pcdhb5Q91XZ5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.92■■□□□ 1.58
Pcdhb5Q91XZ5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb5Q91XZ5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Pcdhb5Q91XZ5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb5Q91XZ5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24.92■■□□□ 1.58
Pcdhb5Q91XZ5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb5Q91XZ5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb5Q91XZ5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb5Q91XZ5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb5Q91XZ5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.91■■□□□ 1.58
Pcdhb5Q91XZ5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb5Q91XZ5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb5Q91XZ5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb5Q91XZ5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb5Q91XZ5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Pcdhb5Q91XZ5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb5Q91XZ5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.9■■□□□ 1.58
Pcdhb5Q91XZ5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb5Q91XZ5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb5Q91XZ5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.89■■□□□ 1.58
Pcdhb5Q91XZ5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhb5Q91XZ5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhb5Q91XZ5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhb5Q91XZ5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.89■■□□□ 1.58
Pcdhb5Q91XZ5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC24.89■■□□□ 1.58
Pcdhb5Q91XZ5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhb5Q91XZ5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhb5Q91XZ5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdhb5Q91XZ5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.57
Pcdhb5Q91XZ5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdhb5Q91XZ5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.89■■□□□ 1.57
Pcdhb5Q91XZ5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb5Q91XZ5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb5Q91XZ5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb5Q91XZ5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC24.87■■□□□ 1.57
Pcdhb5Q91XZ5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhb5Q91XZ5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhb5Q91XZ5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
Pcdhb5Q91XZ5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.86■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms