Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhb8Q91XZ2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb8Q91XZ2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb8Q91XZ2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb8Q91XZ2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Pcdhb8Q91XZ2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.51■□□□□ 0.87
Pcdhb8Q91XZ2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb8Q91XZ2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdhb8Q91XZ2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb8Q91XZ2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb8Q91XZ2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb8Q91XZ2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb8Q91XZ2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb8Q91XZ2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb8Q91XZ2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb8Q91XZ2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb8Q91XZ2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.49■□□□□ 0.87
Pcdhb8Q91XZ2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb8Q91XZ2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb8Q91XZ2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhb8Q91XZ2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb8Q91XZ2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pcdhb8Q91XZ2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb8Q91XZ2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb8Q91XZ2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb8Q91XZ2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb8Q91XZ2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb8Q91XZ2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhb8Q91XZ2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.47■□□□□ 0.87
Pcdhb8Q91XZ2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb8Q91XZ2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb8Q91XZ2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb8Q91XZ2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhb8Q91XZ2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhb8Q91XZ2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb8Q91XZ2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb8Q91XZ2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhb8Q91XZ2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhb8Q91XZ2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb8Q91XZ2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb8Q91XZ2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb8Q91XZ2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb8Q91XZ2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb8Q91XZ2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhb8Q91XZ2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb8Q91XZ2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb8Q91XZ2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb8Q91XZ2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb8Q91XZ2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb8Q91XZ2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb8Q91XZ2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb8Q91XZ2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb8Q91XZ2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb8Q91XZ2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcdhb8Q91XZ2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb8Q91XZ2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb8Q91XZ2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdhb8Q91XZ2 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms