Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb2Q91XX7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb2Q91XX7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb2Q91XX7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb2Q91XX7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb2Q91XX7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.73■□□□□ 0.75
Pcdhgb2Q91XX7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb2Q91XX7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb2Q91XX7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgb2Q91XX7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb2Q91XX7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb2Q91XX7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb2Q91XX7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhgb2Q91XX7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb2Q91XX7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgb2Q91XX7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb2Q91XX7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb2Q91XX7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb2Q91XX7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgb2Q91XX7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Pcdhgb2Q91XX7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhgb2Q91XX7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb2Q91XX7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb2Q91XX7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb2Q91XX7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Pcdhgb2Q91XX7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Pcdhgb2Q91XX7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb2Q91XX7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb2Q91XX7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb2Q91XX7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgb2Q91XX7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhgb2Q91XX7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb2Q91XX7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb2Q91XX7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb2Q91XX7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb2Q91XX7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdhgb2Q91XX7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb2Q91XX7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb2Q91XX7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdhgb2Q91XX7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb2Q91XX7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgb2Q91XX7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb2Q91XX7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb2Q91XX7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhgb2Q91XX7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Pcdhgb2Q91XX7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdhgb2Q91XX7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb2Q91XX7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhgb2Q91XX7 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhgb2Q91XX7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb2Q91XX7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb2Q91XX7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pcdhgb2Q91XX7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdhgb2Q91XX7 Gm9806-201ENSMUST00000051080 552 ntBASIC19.65■□□□□ 0.74
Pcdhgb2Q91XX7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb2Q91XX7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb2Q91XX7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhgb2Q91XX7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Pcdhgb2Q91XX7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Pcdhgb2Q91XX7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb2Q91XX7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.64■□□□□ 0.73
Pcdhgb2Q91XX7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdhgb2Q91XX7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb2Q91XX7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb2Q91XX7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhgb2Q91XX7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Scarna2-201ENSMUST00000157560 414 ntBASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhgb2Q91XX7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb2Q91XX7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb2Q91XX7 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.62■□□□□ 0.73
Pcdhgb2Q91XX7 Gm16437-201ENSMUST00000025669 507 ntBASIC19.62■□□□□ 0.73
Pcdhgb2Q91XX7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhgb2Q91XX7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms