Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb4Q91XX6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pcdhgb4Q91XX6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb4Q91XX6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb4Q91XX6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb4Q91XX6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.24■■□□□ 1.15
Pcdhgb4Q91XX6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb4Q91XX6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb4Q91XX6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb4Q91XX6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb4Q91XX6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb4Q91XX6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb4Q91XX6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgb4Q91XX6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb4Q91XX6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb4Q91XX6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb4Q91XX6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb4Q91XX6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdhgb4Q91XX6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.23■■□□□ 1.15
Pcdhgb4Q91XX6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb4Q91XX6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb4Q91XX6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Pcdhgb4Q91XX6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb4Q91XX6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb4Q91XX6 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.22■■□□□ 1.15
Pcdhgb4Q91XX6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgb4Q91XX6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgb4Q91XX6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Pcdhgb4Q91XX6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgb4Q91XX6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgb4Q91XX6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Pcdhgb4Q91XX6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgb4Q91XX6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Pcdhgb4Q91XX6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Pcdhgb4Q91XX6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.21■■□□□ 1.15
Pcdhgb4Q91XX6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgb4Q91XX6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgb4Q91XX6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Pcdhgb4Q91XX6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Pcdhgb4Q91XX6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Pcdhgb4Q91XX6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.2■■□□□ 1.14
Pcdhgb4Q91XX6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb4Q91XX6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb4Q91XX6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb4Q91XX6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb4Q91XX6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb4Q91XX6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb4Q91XX6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb4Q91XX6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.19■■□□□ 1.14
Pcdhgb4Q91XX6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb4Q91XX6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb4Q91XX6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb4Q91XX6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Pcdhgb4Q91XX6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.18■■□□□ 1.14
Pcdhgb4Q91XX6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb4Q91XX6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb4Q91XX6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Pcdhgb4Q91XX6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb4Q91XX6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Pcdhgb4Q91XX6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Pcdhgb4Q91XX6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Pcdhgb4Q91XX6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdhgb4Q91XX6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb4Q91XX6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb4Q91XX6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb4Q91XX6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb4Q91XX6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdhgb4Q91XX6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb4Q91XX6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Pcdhgb4Q91XX6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb4Q91XX6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb4Q91XX6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.16■■□□□ 1.14
Pcdhgb4Q91XX6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb4Q91XX6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb4Q91XX6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb4Q91XX6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb4Q91XX6 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.15■■□□□ 1.14
Pcdhgb4Q91XX6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb4Q91XX6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb4Q91XX6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb4Q91XX6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
Pcdhgb4Q91XX6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.15■■□□□ 1.14
Pcdhgb4Q91XX6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.14■■□□□ 1.14
Pcdhgb4Q91XX6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhgb4Q91XX6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgb4Q91XX6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgb4Q91XX6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.14■■□□□ 1.13
Pcdhgb4Q91XX6 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.14■■□□□ 1.13
Pcdhgb4Q91XX6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgb4Q91XX6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgb4Q91XX6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb4Q91XX6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb4Q91XX6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb4Q91XX6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb4Q91XX6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb4Q91XX6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.13■■□□□ 1.13
Pcdhgb4Q91XX6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.13■■□□□ 1.13
Pcdhgb4Q91XX6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb4Q91XX6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb4Q91XX6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms