Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhb17Q91VD8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb17Q91VD8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhb17Q91VD8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.79■■□□□ 1.08
Pcdhb17Q91VD8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdhb17Q91VD8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdhb17Q91VD8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb17Q91VD8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb17Q91VD8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb17Q91VD8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Pcdhb17Q91VD8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.78■■□□□ 1.08
Pcdhb17Q91VD8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb17Q91VD8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb17Q91VD8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb17Q91VD8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb17Q91VD8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb17Q91VD8 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.77■■□□□ 1.08
Pcdhb17Q91VD8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb17Q91VD8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdhb17Q91VD8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhb17Q91VD8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb17Q91VD8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb17Q91VD8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb17Q91VD8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb17Q91VD8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.76■■□□□ 1.07
Pcdhb17Q91VD8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb17Q91VD8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhb17Q91VD8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb17Q91VD8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb17Q91VD8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhb17Q91VD8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb17Q91VD8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb17Q91VD8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.75■■□□□ 1.07
Pcdhb17Q91VD8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb17Q91VD8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb17Q91VD8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb17Q91VD8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb17Q91VD8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb17Q91VD8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb17Q91VD8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhb17Q91VD8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhb17Q91VD8 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.74■■□□□ 1.07
Pcdhb17Q91VD8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb17Q91VD8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Pcdhb17Q91VD8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb17Q91VD8 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.74■■□□□ 1.07
Pcdhb17Q91VD8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb17Q91VD8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb17Q91VD8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb17Q91VD8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhb17Q91VD8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb17Q91VD8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb17Q91VD8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb17Q91VD8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb17Q91VD8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb17Q91VD8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Pcdhb17Q91VD8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb17Q91VD8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdhb17Q91VD8 Gm40881-201ENSMUST00000223397 166 ntBASIC21.72■■□□□ 1.07
Pcdhb17Q91VD8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb17Q91VD8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb17Q91VD8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb17Q91VD8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb17Q91VD8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb17Q91VD8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb17Q91VD8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb17Q91VD8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb17Q91VD8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdhb17Q91VD8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb17Q91VD8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb17Q91VD8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb17Q91VD8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb17Q91VD8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb17Q91VD8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.69■■□□□ 1.06
Pcdhb17Q91VD8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb17Q91VD8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb17Q91VD8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb17Q91VD8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdhb17Q91VD8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb17Q91VD8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdhb17Q91VD8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhb17Q91VD8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.68■■□□□ 1.06
Pcdhb17Q91VD8 Gm45102-201ENSMUST00000207427 857 ntBASIC21.68■■□□□ 1.06
Pcdhb17Q91VD8 Rps24-207ENSMUST00000224568 714 ntBASIC21.68■■□□□ 1.06
Pcdhb17Q91VD8 Gm9959-201ENSMUST00000068277 390 ntBASIC21.68■■□□□ 1.06
Pcdhb17Q91VD8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb17Q91VD8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb17Q91VD8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhb17Q91VD8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb17Q91VD8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb17Q91VD8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb17Q91VD8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.67■■□□□ 1.06
Pcdhb17Q91VD8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb17Q91VD8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb17Q91VD8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Pcdhb17Q91VD8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb17Q91VD8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb17Q91VD8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.66■■□□□ 1.06
Pcdhb17Q91VD8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.66■■□□□ 1.06
Pcdhb17Q91VD8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms