Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.86■■□□□ 1.25
Vopp1Q8R1C3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Vopp1Q8R1C3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Vopp1Q8R1C3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Vopp1Q8R1C3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Vopp1Q8R1C3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.85■■□□□ 1.25
Vopp1Q8R1C3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Vopp1Q8R1C3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Vopp1Q8R1C3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vopp1Q8R1C3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Vopp1Q8R1C3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Vopp1Q8R1C3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vopp1Q8R1C3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.84■■□□□ 1.25
Vopp1Q8R1C3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vopp1Q8R1C3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
Vopp1Q8R1C3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vopp1Q8R1C3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Vopp1Q8R1C3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Vopp1Q8R1C3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Vopp1Q8R1C3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.83■■□□□ 1.25
Vopp1Q8R1C3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Vopp1Q8R1C3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Vopp1Q8R1C3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Vopp1Q8R1C3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.82■■□□□ 1.24
Vopp1Q8R1C3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vopp1Q8R1C3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Vopp1Q8R1C3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Vopp1Q8R1C3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vopp1Q8R1C3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vopp1Q8R1C3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.8■■□□□ 1.24
Vopp1Q8R1C3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Vopp1Q8R1C3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.8■■□□□ 1.24
Vopp1Q8R1C3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Vopp1Q8R1C3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Vopp1Q8R1C3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Vopp1Q8R1C3 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.79■■□□□ 1.24
Vopp1Q8R1C3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vopp1Q8R1C3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Vopp1Q8R1C3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vopp1Q8R1C3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vopp1Q8R1C3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vopp1Q8R1C3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Vopp1Q8R1C3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vopp1Q8R1C3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
Vopp1Q8R1C3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Vopp1Q8R1C3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Vopp1Q8R1C3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vopp1Q8R1C3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vopp1Q8R1C3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Vopp1Q8R1C3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Vopp1Q8R1C3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Vopp1Q8R1C3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Vopp1Q8R1C3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Vopp1Q8R1C3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.76■■□□□ 1.23
Vopp1Q8R1C3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.76■■□□□ 1.23
Vopp1Q8R1C3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.76■■□□□ 1.23
Vopp1Q8R1C3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Vopp1Q8R1C3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.76■■□□□ 1.23
Vopp1Q8R1C3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vopp1Q8R1C3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vopp1Q8R1C3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Vopp1Q8R1C3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Vopp1Q8R1C3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Vopp1Q8R1C3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Vopp1Q8R1C3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Vopp1Q8R1C3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.75■■□□□ 1.23
Vopp1Q8R1C3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vopp1Q8R1C3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vopp1Q8R1C3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.74■■□□□ 1.23
Vopp1Q8R1C3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vopp1Q8R1C3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.73■■□□□ 1.23
Vopp1Q8R1C3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Vopp1Q8R1C3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Vopp1Q8R1C3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Vopp1Q8R1C3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vopp1Q8R1C3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vopp1Q8R1C3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vopp1Q8R1C3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vopp1Q8R1C3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vopp1Q8R1C3 Gm27454-201ENSMUST00000185090 204 ntBASIC22.72■■□□□ 1.23
Vopp1Q8R1C3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Vopp1Q8R1C3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Vopp1Q8R1C3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vopp1Q8R1C3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vopp1Q8R1C3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Vopp1Q8R1C3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Vopp1Q8R1C3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Vopp1Q8R1C3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC22.71■■□□□ 1.23
Vopp1Q8R1C3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Vopp1Q8R1C3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Vopp1Q8R1C3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Vopp1Q8R1C3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Vopp1Q8R1C3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Vopp1Q8R1C3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.7■■□□□ 1.22
Vopp1Q8R1C3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Vopp1Q8R1C3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Vopp1Q8R1C3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Vopp1Q8R1C3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Vopp1Q8R1C3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Vopp1Q8R1C3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms