Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lin28aQ8K3Y3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28aQ8K3Y3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28aQ8K3Y3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28aQ8K3Y3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28aQ8K3Y3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28aQ8K3Y3 Gm10399-202ENSMUST00000202768 748 ntBASIC19.66■□□□□ 0.74
Lin28aQ8K3Y3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28aQ8K3Y3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lin28aQ8K3Y3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lin28aQ8K3Y3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28aQ8K3Y3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Lin28aQ8K3Y3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28aQ8K3Y3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28aQ8K3Y3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28aQ8K3Y3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28aQ8K3Y3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28aQ8K3Y3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28aQ8K3Y3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28aQ8K3Y3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28aQ8K3Y3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lin28aQ8K3Y3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Lin28aQ8K3Y3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lin28aQ8K3Y3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lin28aQ8K3Y3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.64■□□□□ 0.73
Lin28aQ8K3Y3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lin28aQ8K3Y3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lin28aQ8K3Y3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Lin28aQ8K3Y3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lin28aQ8K3Y3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lin28aQ8K3Y3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.64■□□□□ 0.73
Lin28aQ8K3Y3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lin28aQ8K3Y3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lin28aQ8K3Y3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lin28aQ8K3Y3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lin28aQ8K3Y3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.63■□□□□ 0.73
Lin28aQ8K3Y3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lin28aQ8K3Y3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.62■□□□□ 0.73
Lin28aQ8K3Y3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lin28aQ8K3Y3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.62■□□□□ 0.73
Lin28aQ8K3Y3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lin28aQ8K3Y3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lin28aQ8K3Y3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Lin28aQ8K3Y3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lin28aQ8K3Y3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
Lin28aQ8K3Y3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.61■□□□□ 0.73
Lin28aQ8K3Y3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lin28aQ8K3Y3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lin28aQ8K3Y3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lin28aQ8K3Y3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Lin28aQ8K3Y3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lin28aQ8K3Y3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Lin28aQ8K3Y3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lin28aQ8K3Y3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Lin28aQ8K3Y3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lin28aQ8K3Y3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lin28aQ8K3Y3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lin28aQ8K3Y3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lin28aQ8K3Y3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lin28aQ8K3Y3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.59■□□□□ 0.73
Lin28aQ8K3Y3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.59■□□□□ 0.73
Lin28aQ8K3Y3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lin28aQ8K3Y3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.59■□□□□ 0.73
Lin28aQ8K3Y3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lin28aQ8K3Y3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lin28aQ8K3Y3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Lin28aQ8K3Y3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.58■□□□□ 0.72
Lin28aQ8K3Y3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28aQ8K3Y3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28aQ8K3Y3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28aQ8K3Y3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28aQ8K3Y3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28aQ8K3Y3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28aQ8K3Y3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28aQ8K3Y3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lin28aQ8K3Y3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Lin28aQ8K3Y3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Lin28aQ8K3Y3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Lin28aQ8K3Y3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms