Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc47a1Q8K0H1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc47a1Q8K0H1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc47a1Q8K0H1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc47a1Q8K0H1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.64■□□□□ 0.9
Slc47a1Q8K0H1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Slc47a1Q8K0H1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.64■□□□□ 0.9
Slc47a1Q8K0H1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Slc47a1Q8K0H1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc47a1Q8K0H1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc47a1Q8K0H1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc47a1Q8K0H1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc47a1Q8K0H1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc47a1Q8K0H1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc47a1Q8K0H1 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.63■□□□□ 0.89
Slc47a1Q8K0H1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc47a1Q8K0H1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc47a1Q8K0H1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc47a1Q8K0H1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc47a1Q8K0H1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc47a1Q8K0H1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc47a1Q8K0H1 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.62■□□□□ 0.89
Slc47a1Q8K0H1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc47a1Q8K0H1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc47a1Q8K0H1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc47a1Q8K0H1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc47a1Q8K0H1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.61■□□□□ 0.89
Slc47a1Q8K0H1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc47a1Q8K0H1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc47a1Q8K0H1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
Slc47a1Q8K0H1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc47a1Q8K0H1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc47a1Q8K0H1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc47a1Q8K0H1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Slc47a1Q8K0H1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.6■□□□□ 0.89
Slc47a1Q8K0H1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc47a1Q8K0H1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc47a1Q8K0H1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc47a1Q8K0H1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc47a1Q8K0H1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc47a1Q8K0H1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc47a1Q8K0H1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.58■□□□□ 0.89
Slc47a1Q8K0H1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc47a1Q8K0H1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Slc47a1Q8K0H1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc47a1Q8K0H1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.58■□□□□ 0.88
Slc47a1Q8K0H1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Slc47a1Q8K0H1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Slc47a1Q8K0H1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc47a1Q8K0H1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc47a1Q8K0H1 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.57■□□□□ 0.88
Slc47a1Q8K0H1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Slc47a1Q8K0H1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc47a1Q8K0H1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc47a1Q8K0H1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc47a1Q8K0H1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc47a1Q8K0H1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc47a1Q8K0H1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc47a1Q8K0H1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc47a1Q8K0H1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc47a1Q8K0H1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc47a1Q8K0H1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc47a1Q8K0H1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc47a1Q8K0H1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Slc47a1Q8K0H1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc47a1Q8K0H1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc47a1Q8K0H1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc47a1Q8K0H1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Slc47a1Q8K0H1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc47a1Q8K0H1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Slc47a1Q8K0H1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Slc47a1Q8K0H1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc47a1Q8K0H1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc47a1Q8K0H1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.54■□□□□ 0.88
Slc47a1Q8K0H1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.54■□□□□ 0.88
Slc47a1Q8K0H1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Slc47a1Q8K0H1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc47a1Q8K0H1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Slc47a1Q8K0H1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc47a1Q8K0H1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc47a1Q8K0H1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc47a1Q8K0H1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc47a1Q8K0H1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc47a1Q8K0H1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc47a1Q8K0H1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc47a1Q8K0H1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc47a1Q8K0H1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms