Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.92■■□□□ 1.1
Kdm1bQ8CIG3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Kdm1bQ8CIG3 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.91■■□□□ 1.1
Kdm1bQ8CIG3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
Kdm1bQ8CIG3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1bQ8CIG3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1bQ8CIG3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1bQ8CIG3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1bQ8CIG3 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.9■■□□□ 1.1
Kdm1bQ8CIG3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1bQ8CIG3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1bQ8CIG3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Kdm1bQ8CIG3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Kdm1bQ8CIG3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Kdm1bQ8CIG3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Kdm1bQ8CIG3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.89■■□□□ 1.09
Kdm1bQ8CIG3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Kdm1bQ8CIG3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.89■■□□□ 1.09
Kdm1bQ8CIG3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.89■■□□□ 1.09
Kdm1bQ8CIG3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Kdm1bQ8CIG3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Kdm1bQ8CIG3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Kdm1bQ8CIG3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Kdm1bQ8CIG3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1bQ8CIG3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1bQ8CIG3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1bQ8CIG3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.88■■□□□ 1.09
Kdm1bQ8CIG3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1bQ8CIG3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1bQ8CIG3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.88■■□□□ 1.09
Kdm1bQ8CIG3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1bQ8CIG3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Kdm1bQ8CIG3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1bQ8CIG3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1bQ8CIG3 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.87■■□□□ 1.09
Kdm1bQ8CIG3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.87■■□□□ 1.09
Kdm1bQ8CIG3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.87■■□□□ 1.09
Kdm1bQ8CIG3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1bQ8CIG3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1bQ8CIG3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.87■■□□□ 1.09
Kdm1bQ8CIG3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Kdm1bQ8CIG3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1bQ8CIG3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1bQ8CIG3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.86■■□□□ 1.09
Kdm1bQ8CIG3 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.86■■□□□ 1.09
Kdm1bQ8CIG3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1bQ8CIG3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1bQ8CIG3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Kdm1bQ8CIG3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Kdm1bQ8CIG3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Kdm1bQ8CIG3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1bQ8CIG3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1bQ8CIG3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1bQ8CIG3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1bQ8CIG3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1bQ8CIG3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1bQ8CIG3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Kdm1bQ8CIG3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.85■■□□□ 1.09
Kdm1bQ8CIG3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Kdm1bQ8CIG3 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.84■■□□□ 1.09
Kdm1bQ8CIG3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Kdm1bQ8CIG3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.84■■□□□ 1.09
Kdm1bQ8CIG3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
Kdm1bQ8CIG3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Kdm1bQ8CIG3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.84■■□□□ 1.09
Kdm1bQ8CIG3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Kdm1bQ8CIG3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Kdm1bQ8CIG3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.83■■□□□ 1.09
Kdm1bQ8CIG3 Gm45444-201ENSMUST00000211394 898 ntBASIC21.83■■□□□ 1.09
Kdm1bQ8CIG3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Kdm1bQ8CIG3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Kdm1bQ8CIG3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Kdm1bQ8CIG3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Kdm1bQ8CIG3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Kdm1bQ8CIG3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Kdm1bQ8CIG3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Kdm1bQ8CIG3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Kdm1bQ8CIG3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Kdm1bQ8CIG3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.82■■□□□ 1.08
Kdm1bQ8CIG3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Gm13238-201ENSMUST00000117655 780 ntBASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Kdm1bQ8CIG3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Kdm1bQ8CIG3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Kdm1bQ8CIG3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Kdm1bQ8CIG3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms