Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Calcoco1Q8CGU1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.73■■□□□ 1.07
Calcoco1Q8CGU1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Calcoco1Q8CGU1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
Calcoco1Q8CGU1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Calcoco1Q8CGU1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Calcoco1Q8CGU1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Calcoco1Q8CGU1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Calcoco1Q8CGU1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Calcoco1Q8CGU1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Calcoco1Q8CGU1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Calcoco1Q8CGU1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Calcoco1Q8CGU1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Calcoco1Q8CGU1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Calcoco1Q8CGU1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Calcoco1Q8CGU1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Calcoco1Q8CGU1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Calcoco1Q8CGU1 Gm44428-201ENSMUST00000204474 874 ntBASIC21.7■■□□□ 1.06
Calcoco1Q8CGU1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Calcoco1Q8CGU1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Calcoco1Q8CGU1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Calcoco1Q8CGU1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Calcoco1Q8CGU1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Calcoco1Q8CGU1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Calcoco1Q8CGU1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Calcoco1Q8CGU1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Calcoco1Q8CGU1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Calcoco1Q8CGU1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Calcoco1Q8CGU1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Calcoco1Q8CGU1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Calcoco1Q8CGU1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Calcoco1Q8CGU1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Calcoco1Q8CGU1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Calcoco1Q8CGU1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.68■■□□□ 1.06
Calcoco1Q8CGU1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.68■■□□□ 1.06
Calcoco1Q8CGU1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Calcoco1Q8CGU1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
Calcoco1Q8CGU1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Calcoco1Q8CGU1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Calcoco1Q8CGU1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Calcoco1Q8CGU1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Calcoco1Q8CGU1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Calcoco1Q8CGU1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Calcoco1Q8CGU1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.67■■□□□ 1.06
Calcoco1Q8CGU1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Calcoco1Q8CGU1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Calcoco1Q8CGU1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Calcoco1Q8CGU1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Calcoco1Q8CGU1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.66■■□□□ 1.06
Calcoco1Q8CGU1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Calcoco1Q8CGU1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Calcoco1Q8CGU1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Calcoco1Q8CGU1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Calcoco1Q8CGU1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Calcoco1Q8CGU1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.65■■□□□ 1.06
Calcoco1Q8CGU1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Calcoco1Q8CGU1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Calcoco1Q8CGU1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Calcoco1Q8CGU1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Calcoco1Q8CGU1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.64■■□□□ 1.06
Calcoco1Q8CGU1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Calcoco1Q8CGU1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Calcoco1Q8CGU1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Calcoco1Q8CGU1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Calcoco1Q8CGU1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Calcoco1Q8CGU1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Calcoco1Q8CGU1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Calcoco1Q8CGU1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Calcoco1Q8CGU1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Calcoco1Q8CGU1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Calcoco1Q8CGU1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
Calcoco1Q8CGU1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Calcoco1Q8CGU1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Calcoco1Q8CGU1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Calcoco1Q8CGU1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Calcoco1Q8CGU1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Calcoco1Q8CGU1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Calcoco1Q8CGU1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Calcoco1Q8CGU1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.6■■□□□ 1.05
Calcoco1Q8CGU1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.6■■□□□ 1.05
Calcoco1Q8CGU1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Calcoco1Q8CGU1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Calcoco1Q8CGU1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Calcoco1Q8CGU1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
Calcoco1Q8CGU1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Calcoco1Q8CGU1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Calcoco1Q8CGU1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Calcoco1Q8CGU1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms