Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ShfQ8CG80 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ShfQ8CG80 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ShfQ8CG80 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.79■□□□□ 0.6
ShfQ8CG80 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ShfQ8CG80 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ShfQ8CG80 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ShfQ8CG80 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShfQ8CG80 Gm14523-201ENSMUST00000117260 558 ntBASIC18.78■□□□□ 0.6
ShfQ8CG80 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShfQ8CG80 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShfQ8CG80 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShfQ8CG80 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShfQ8CG80 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ShfQ8CG80 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
ShfQ8CG80 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShfQ8CG80 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.77■□□□□ 0.6
ShfQ8CG80 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ShfQ8CG80 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.76■□□□□ 0.59
ShfQ8CG80 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShfQ8CG80 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ShfQ8CG80 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShfQ8CG80 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.76■□□□□ 0.59
ShfQ8CG80 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.76■□□□□ 0.59
ShfQ8CG80 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShfQ8CG80 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ShfQ8CG80 Gm27502-201ENSMUST00000183495 199 ntBASIC18.75■□□□□ 0.59
ShfQ8CG80 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ShfQ8CG80 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.75■□□□□ 0.59
ShfQ8CG80 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ShfQ8CG80 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
ShfQ8CG80 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ShfQ8CG80 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ShfQ8CG80 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.75■□□□□ 0.59
ShfQ8CG80 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShfQ8CG80 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShfQ8CG80 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.74■□□□□ 0.59
ShfQ8CG80 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShfQ8CG80 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShfQ8CG80 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShfQ8CG80 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShfQ8CG80 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShfQ8CG80 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShfQ8CG80 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShfQ8CG80 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
ShfQ8CG80 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ShfQ8CG80 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShfQ8CG80 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ShfQ8CG80 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShfQ8CG80 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShfQ8CG80 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ShfQ8CG80 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ShfQ8CG80 Gm7332-201ENSMUST00000118351 454 ntBASIC18.72■□□□□ 0.59
ShfQ8CG80 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ShfQ8CG80 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ShfQ8CG80 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ShfQ8CG80 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ShfQ8CG80 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ShfQ8CG80 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ShfQ8CG80 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.71■□□□□ 0.59
ShfQ8CG80 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ShfQ8CG80 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.71■□□□□ 0.59
ShfQ8CG80 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
ShfQ8CG80 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ShfQ8CG80 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShfQ8CG80 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShfQ8CG80 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.7■□□□□ 0.58
ShfQ8CG80 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShfQ8CG80 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ShfQ8CG80 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.7■□□□□ 0.58
ShfQ8CG80 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShfQ8CG80 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ShfQ8CG80 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShfQ8CG80 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShfQ8CG80 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ShfQ8CG80 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
ShfQ8CG80 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ShfQ8CG80 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ShfQ8CG80 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ShfQ8CG80 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.69■□□□□ 0.58
ShfQ8CG80 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ShfQ8CG80 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ShfQ8CG80 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ShfQ8CG80 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ShfQ8CG80 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ShfQ8CG80 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ShfQ8CG80 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ShfQ8CG80 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShfQ8CG80 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.67■□□□□ 0.58
ShfQ8CG80 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ShfQ8CG80 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShfQ8CG80 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ShfQ8CG80 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShfQ8CG80 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShfQ8CG80 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
ShfQ8CG80 Gm11175-201ENSMUST00000116172 543 ntBASIC18.66■□□□□ 0.58
ShfQ8CG80 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.66■□□□□ 0.58
ShfQ8CG80 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ShfQ8CG80 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
ShfQ8CG80 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms