Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc46a2Q8CA03 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc46a2Q8CA03 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc46a2Q8CA03 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc46a2Q8CA03 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Slc46a2Q8CA03 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc46a2Q8CA03 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc46a2Q8CA03 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc46a2Q8CA03 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc46a2Q8CA03 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.17■□□□□ 0.82
Slc46a2Q8CA03 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc46a2Q8CA03 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slc46a2Q8CA03 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Slc46a2Q8CA03 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc46a2Q8CA03 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slc46a2Q8CA03 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a2Q8CA03 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.15■□□□□ 0.82
Slc46a2Q8CA03 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.15■□□□□ 0.82
Slc46a2Q8CA03 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Slc46a2Q8CA03 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.15■□□□□ 0.82
Slc46a2Q8CA03 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc46a2Q8CA03 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc46a2Q8CA03 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Slc46a2Q8CA03 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc46a2Q8CA03 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc46a2Q8CA03 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc46a2Q8CA03 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc46a2Q8CA03 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc46a2Q8CA03 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc46a2Q8CA03 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc46a2Q8CA03 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.13■□□□□ 0.81
Slc46a2Q8CA03 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.13■□□□□ 0.81
Slc46a2Q8CA03 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc46a2Q8CA03 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc46a2Q8CA03 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc46a2Q8CA03 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Slc46a2Q8CA03 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc46a2Q8CA03 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Slc46a2Q8CA03 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Slc46a2Q8CA03 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.12■□□□□ 0.81
Slc46a2Q8CA03 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Slc46a2Q8CA03 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc46a2Q8CA03 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc46a2Q8CA03 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc46a2Q8CA03 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.11■□□□□ 0.81
Slc46a2Q8CA03 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc46a2Q8CA03 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc46a2Q8CA03 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Slc46a2Q8CA03 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.1■□□□□ 0.81
Slc46a2Q8CA03 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Slc46a2Q8CA03 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc46a2Q8CA03 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc46a2Q8CA03 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.1■□□□□ 0.81
Slc46a2Q8CA03 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.1■□□□□ 0.81
Slc46a2Q8CA03 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Slc46a2Q8CA03 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc46a2Q8CA03 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.08■□□□□ 0.81
Slc46a2Q8CA03 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc46a2Q8CA03 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc46a2Q8CA03 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Slc46a2Q8CA03 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc46a2Q8CA03 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms