Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gm10420-201ENSMUST00000121713 882 ntBASIC18.59■□□□□ 0.57
Rft1Q8C3B8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rft1Q8C3B8 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.59■□□□□ 0.57
Rft1Q8C3B8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rft1Q8C3B8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rft1Q8C3B8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rft1Q8C3B8 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.58■□□□□ 0.57
Rft1Q8C3B8 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.58■□□□□ 0.56
Rft1Q8C3B8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rft1Q8C3B8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rft1Q8C3B8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rft1Q8C3B8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rft1Q8C3B8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Rft1Q8C3B8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rft1Q8C3B8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rft1Q8C3B8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rft1Q8C3B8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rft1Q8C3B8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rft1Q8C3B8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.57■□□□□ 0.56
Rft1Q8C3B8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rft1Q8C3B8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rft1Q8C3B8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rft1Q8C3B8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Rft1Q8C3B8 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.57■□□□□ 0.56
Rft1Q8C3B8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rft1Q8C3B8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rft1Q8C3B8 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.56■□□□□ 0.56
Rft1Q8C3B8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rft1Q8C3B8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rft1Q8C3B8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rft1Q8C3B8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.56■□□□□ 0.56
Rft1Q8C3B8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rft1Q8C3B8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rft1Q8C3B8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rft1Q8C3B8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rft1Q8C3B8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rft1Q8C3B8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.55■□□□□ 0.56
Rft1Q8C3B8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rft1Q8C3B8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rft1Q8C3B8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rft1Q8C3B8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rft1Q8C3B8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Rft1Q8C3B8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rft1Q8C3B8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rft1Q8C3B8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rft1Q8C3B8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rft1Q8C3B8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rft1Q8C3B8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rft1Q8C3B8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rft1Q8C3B8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rft1Q8C3B8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rft1Q8C3B8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rft1Q8C3B8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rft1Q8C3B8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Rft1Q8C3B8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rft1Q8C3B8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rft1Q8C3B8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rft1Q8C3B8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
Rft1Q8C3B8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rft1Q8C3B8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rft1Q8C3B8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rft1Q8C3B8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rft1Q8C3B8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rft1Q8C3B8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rft1Q8C3B8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rft1Q8C3B8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Rft1Q8C3B8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rft1Q8C3B8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rft1Q8C3B8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rft1Q8C3B8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rft1Q8C3B8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms