Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Lrtm1Q8BXQ3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrtm1Q8BXQ3 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.43■□□□□ 0.54
Lrtm1Q8BXQ3 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.43■□□□□ 0.54
Lrtm1Q8BXQ3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrtm1Q8BXQ3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrtm1Q8BXQ3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Lrtm1Q8BXQ3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lrtm1Q8BXQ3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrtm1Q8BXQ3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lrtm1Q8BXQ3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.42■□□□□ 0.54
Lrtm1Q8BXQ3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrtm1Q8BXQ3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrtm1Q8BXQ3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Lrtm1Q8BXQ3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lrtm1Q8BXQ3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrtm1Q8BXQ3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrtm1Q8BXQ3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lrtm1Q8BXQ3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lrtm1Q8BXQ3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lrtm1Q8BXQ3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.41■□□□□ 0.54
Lrtm1Q8BXQ3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrtm1Q8BXQ3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lrtm1Q8BXQ3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrtm1Q8BXQ3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrtm1Q8BXQ3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrtm1Q8BXQ3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrtm1Q8BXQ3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrtm1Q8BXQ3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.4■□□□□ 0.54
Lrtm1Q8BXQ3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.4■□□□□ 0.54
Lrtm1Q8BXQ3 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.4■□□□□ 0.54
Lrtm1Q8BXQ3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrtm1Q8BXQ3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lrtm1Q8BXQ3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.39■□□□□ 0.53
Lrtm1Q8BXQ3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrtm1Q8BXQ3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrtm1Q8BXQ3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrtm1Q8BXQ3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrtm1Q8BXQ3 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.38■□□□□ 0.53
Lrtm1Q8BXQ3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrtm1Q8BXQ3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrtm1Q8BXQ3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lrtm1Q8BXQ3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lrtm1Q8BXQ3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrtm1Q8BXQ3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lrtm1Q8BXQ3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrtm1Q8BXQ3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrtm1Q8BXQ3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lrtm1Q8BXQ3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.37■□□□□ 0.53
Lrtm1Q8BXQ3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrtm1Q8BXQ3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrtm1Q8BXQ3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.36■□□□□ 0.53
Lrtm1Q8BXQ3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Lrtm1Q8BXQ3 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.36■□□□□ 0.53
Lrtm1Q8BXQ3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrtm1Q8BXQ3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lrtm1Q8BXQ3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrtm1Q8BXQ3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Lrtm1Q8BXQ3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrtm1Q8BXQ3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrtm1Q8BXQ3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lrtm1Q8BXQ3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.35■□□□□ 0.53
Lrtm1Q8BXQ3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.35■□□□□ 0.53
Lrtm1Q8BXQ3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrtm1Q8BXQ3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.35■□□□□ 0.53
Lrtm1Q8BXQ3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrtm1Q8BXQ3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lrtm1Q8BXQ3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrtm1Q8BXQ3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrtm1Q8BXQ3 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.34■□□□□ 0.53
Lrtm1Q8BXQ3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Lrtm1Q8BXQ3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Lrtm1Q8BXQ3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrtm1Q8BXQ3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrtm1Q8BXQ3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.34■□□□□ 0.53
Lrtm1Q8BXQ3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrtm1Q8BXQ3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrtm1Q8BXQ3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrtm1Q8BXQ3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrtm1Q8BXQ3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrtm1Q8BXQ3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrtm1Q8BXQ3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrtm1Q8BXQ3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrtm1Q8BXQ3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.33■□□□□ 0.52
Lrtm1Q8BXQ3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.33■□□□□ 0.52
Lrtm1Q8BXQ3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrtm1Q8BXQ3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrtm1Q8BXQ3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrtm1Q8BXQ3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrtm1Q8BXQ3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrtm1Q8BXQ3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrtm1Q8BXQ3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.32■□□□□ 0.52
Lrtm1Q8BXQ3 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.32■□□□□ 0.52
Lrtm1Q8BXQ3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.32■□□□□ 0.52
Lrtm1Q8BXQ3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lrtm1Q8BXQ3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrtm1Q8BXQ3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.32■□□□□ 0.52
Lrtm1Q8BXQ3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrtm1Q8BXQ3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lrtm1Q8BXQ3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms