Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl3Q8BLF2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cdkl3Q8BLF2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl3Q8BLF2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl3Q8BLF2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl3Q8BLF2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl3Q8BLF2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Cdkl3Q8BLF2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl3Q8BLF2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.05■□□□□ 0.48
Cdkl3Q8BLF2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl3Q8BLF2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl3Q8BLF2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl3Q8BLF2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.04■□□□□ 0.48
Cdkl3Q8BLF2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Cdkl3Q8BLF2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Cdkl3Q8BLF2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl3Q8BLF2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdkl3Q8BLF2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cdkl3Q8BLF2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl3Q8BLF2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl3Q8BLF2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdkl3Q8BLF2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl3Q8BLF2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Cdkl3Q8BLF2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl3Q8BLF2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.03■□□□□ 0.48
Cdkl3Q8BLF2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl3Q8BLF2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl3Q8BLF2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl3Q8BLF2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl3Q8BLF2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl3Q8BLF2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdkl3Q8BLF2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
Cdkl3Q8BLF2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cdkl3Q8BLF2 Nkain2-201ENSMUST00000092602 558 ntBASIC18.02■□□□□ 0.48
Cdkl3Q8BLF2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdkl3Q8BLF2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cdkl3Q8BLF2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cdkl3Q8BLF2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl3Q8BLF2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl3Q8BLF2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl3Q8BLF2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl3Q8BLF2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl3Q8BLF2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl3Q8BLF2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Cdkl3Q8BLF2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl3Q8BLF2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl3Q8BLF2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdkl3Q8BLF2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cdkl3Q8BLF2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl3Q8BLF2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18■□□□□ 0.47
Cdkl3Q8BLF2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl3Q8BLF2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdkl3Q8BLF2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cdkl3Q8BLF2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Cdkl3Q8BLF2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl3Q8BLF2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl3Q8BLF2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl3Q8BLF2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Cdkl3Q8BLF2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdkl3Q8BLF2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl3Q8BLF2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.99■□□□□ 0.47
Cdkl3Q8BLF2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl3Q8BLF2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkl3Q8BLF2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl3Q8BLF2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl3Q8BLF2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdkl3Q8BLF2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl3Q8BLF2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl3Q8BLF2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl3Q8BLF2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl3Q8BLF2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl3Q8BLF2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkl3Q8BLF2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Cdkl3Q8BLF2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkl3Q8BLF2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkl3Q8BLF2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cdkl3Q8BLF2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cdkl3Q8BLF2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.97■□□□□ 0.47
Cdkl3Q8BLF2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkl3Q8BLF2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkl3Q8BLF2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.97■□□□□ 0.47
Cdkl3Q8BLF2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkl3Q8BLF2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkl3Q8BLF2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkl3Q8BLF2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkl3Q8BLF2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cdkl3Q8BLF2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Cdkl3Q8BLF2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Cdkl3Q8BLF2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkl3Q8BLF2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkl3Q8BLF2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkl3Q8BLF2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cdkl3Q8BLF2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkl3Q8BLF2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkl3Q8BLF2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.95■□□□□ 0.46
Cdkl3Q8BLF2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.95■□□□□ 0.46
Cdkl3Q8BLF2 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.95■□□□□ 0.46
Cdkl3Q8BLF2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkl3Q8BLF2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkl3Q8BLF2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms