Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc5a7Q8BGY9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.43■□□□□ 0.54
Slc5a7Q8BGY9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc5a7Q8BGY9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc5a7Q8BGY9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc5a7Q8BGY9 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.43■□□□□ 0.54
Slc5a7Q8BGY9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc5a7Q8BGY9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.42■□□□□ 0.54
Slc5a7Q8BGY9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc5a7Q8BGY9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc5a7Q8BGY9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc5a7Q8BGY9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slc5a7Q8BGY9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.42■□□□□ 0.54
Slc5a7Q8BGY9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Slc5a7Q8BGY9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc5a7Q8BGY9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc5a7Q8BGY9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc5a7Q8BGY9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc5a7Q8BGY9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Slc5a7Q8BGY9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc5a7Q8BGY9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Slc5a7Q8BGY9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc5a7Q8BGY9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc5a7Q8BGY9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc5a7Q8BGY9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Slc5a7Q8BGY9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc5a7Q8BGY9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc5a7Q8BGY9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Slc5a7Q8BGY9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc5a7Q8BGY9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc5a7Q8BGY9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc5a7Q8BGY9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc5a7Q8BGY9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc5a7Q8BGY9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.39■□□□□ 0.53
Slc5a7Q8BGY9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.39■□□□□ 0.53
Slc5a7Q8BGY9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.39■□□□□ 0.53
Slc5a7Q8BGY9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.39■□□□□ 0.53
Slc5a7Q8BGY9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.39■□□□□ 0.53
Slc5a7Q8BGY9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc5a7Q8BGY9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc5a7Q8BGY9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc5a7Q8BGY9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc5a7Q8BGY9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Slc5a7Q8BGY9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc5a7Q8BGY9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Slc5a7Q8BGY9 Mir3960-201ENSMUST00000198213 73 ntBASIC18.37■□□□□ 0.53
Slc5a7Q8BGY9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc5a7Q8BGY9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc5a7Q8BGY9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc5a7Q8BGY9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc5a7Q8BGY9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc5a7Q8BGY9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc5a7Q8BGY9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc5a7Q8BGY9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc5a7Q8BGY9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc5a7Q8BGY9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc5a7Q8BGY9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Slc5a7Q8BGY9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc5a7Q8BGY9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc5a7Q8BGY9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.33■□□□□ 0.53
Slc5a7Q8BGY9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Slc5a7Q8BGY9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc5a7Q8BGY9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.33■□□□□ 0.52
Slc5a7Q8BGY9 Gm45364-201ENSMUST00000210883 159 ntBASIC18.33■□□□□ 0.52
Slc5a7Q8BGY9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc5a7Q8BGY9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc5a7Q8BGY9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc5a7Q8BGY9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Slc5a7Q8BGY9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc5a7Q8BGY9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.32■□□□□ 0.52
Slc5a7Q8BGY9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc5a7Q8BGY9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc5a7Q8BGY9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms