Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trim23Q8BGX0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim23Q8BGX0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.37■□□□□ 0.85
Trim23Q8BGX0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim23Q8BGX0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim23Q8BGX0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim23Q8BGX0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim23Q8BGX0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim23Q8BGX0 Gm40881-201ENSMUST00000223397 166 ntBASIC20.36■□□□□ 0.85
Trim23Q8BGX0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim23Q8BGX0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim23Q8BGX0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trim23Q8BGX0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim23Q8BGX0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim23Q8BGX0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim23Q8BGX0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trim23Q8BGX0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trim23Q8BGX0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.34■□□□□ 0.85
Trim23Q8BGX0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim23Q8BGX0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim23Q8BGX0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Trim23Q8BGX0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim23Q8BGX0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim23Q8BGX0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim23Q8BGX0 Gm14117-201ENSMUST00000122417 843 ntBASIC20.33■□□□□ 0.85
Trim23Q8BGX0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Trim23Q8BGX0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.33■□□□□ 0.85
Trim23Q8BGX0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.33■□□□□ 0.85
Trim23Q8BGX0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trim23Q8BGX0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim23Q8BGX0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim23Q8BGX0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim23Q8BGX0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trim23Q8BGX0 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.32■□□□□ 0.84
Trim23Q8BGX0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.32■□□□□ 0.84
Trim23Q8BGX0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim23Q8BGX0 Etf1-202ENSMUST00000180351 108 ntBASIC20.32■□□□□ 0.84
Trim23Q8BGX0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim23Q8BGX0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Trim23Q8BGX0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.31■□□□□ 0.84
Trim23Q8BGX0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
Trim23Q8BGX0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim23Q8BGX0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim23Q8BGX0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim23Q8BGX0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Trim23Q8BGX0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trim23Q8BGX0 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.3■□□□□ 0.84
Trim23Q8BGX0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim23Q8BGX0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.3■□□□□ 0.84
Trim23Q8BGX0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.3■□□□□ 0.84
Trim23Q8BGX0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim23Q8BGX0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim23Q8BGX0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim23Q8BGX0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim23Q8BGX0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim23Q8BGX0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.29■□□□□ 0.84
Trim23Q8BGX0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim23Q8BGX0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim23Q8BGX0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim23Q8BGX0 Gm7417-201ENSMUST00000192950 473 ntBASIC20.28■□□□□ 0.84
Trim23Q8BGX0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Trim23Q8BGX0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim23Q8BGX0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim23Q8BGX0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim23Q8BGX0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim23Q8BGX0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim23Q8BGX0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim23Q8BGX0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim23Q8BGX0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim23Q8BGX0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim23Q8BGX0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim23Q8BGX0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim23Q8BGX0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim23Q8BGX0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.24■□□□□ 0.83
Trim23Q8BGX0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim23Q8BGX0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trim23Q8BGX0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim23Q8BGX0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim23Q8BGX0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim23Q8BGX0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim23Q8BGX0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim23Q8BGX0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim23Q8BGX0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim23Q8BGX0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim23Q8BGX0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim23Q8BGX0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim23Q8BGX0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim23Q8BGX0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim23Q8BGX0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms