Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Atg4bQ8BGE6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4bQ8BGE6 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.86■□□□□ 0.77
Atg4bQ8BGE6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.86■□□□□ 0.77
Atg4bQ8BGE6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4bQ8BGE6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4bQ8BGE6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Atg4bQ8BGE6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4bQ8BGE6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4bQ8BGE6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4bQ8BGE6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4bQ8BGE6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4bQ8BGE6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4bQ8BGE6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4bQ8BGE6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4bQ8BGE6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4bQ8BGE6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Atg4bQ8BGE6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Atg4bQ8BGE6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4bQ8BGE6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4bQ8BGE6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4bQ8BGE6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.84■□□□□ 0.77
Atg4bQ8BGE6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atg4bQ8BGE6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.83■□□□□ 0.77
Atg4bQ8BGE6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atg4bQ8BGE6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4bQ8BGE6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Atg4bQ8BGE6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4bQ8BGE6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4bQ8BGE6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Atg4bQ8BGE6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4bQ8BGE6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4bQ8BGE6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Atg4bQ8BGE6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4bQ8BGE6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.81■□□□□ 0.76
Atg4bQ8BGE6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.81■□□□□ 0.76
Atg4bQ8BGE6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.81■□□□□ 0.76
Atg4bQ8BGE6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4bQ8BGE6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4bQ8BGE6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4bQ8BGE6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4bQ8BGE6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
Atg4bQ8BGE6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Atg4bQ8BGE6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Atg4bQ8BGE6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Atg4bQ8BGE6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4bQ8BGE6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4bQ8BGE6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Atg4bQ8BGE6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4bQ8BGE6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4bQ8BGE6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4bQ8BGE6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4bQ8BGE6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.78■□□□□ 0.76
Atg4bQ8BGE6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Atg4bQ8BGE6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4bQ8BGE6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4bQ8BGE6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4bQ8BGE6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4bQ8BGE6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Atg4bQ8BGE6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Atg4bQ8BGE6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4bQ8BGE6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4bQ8BGE6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4bQ8BGE6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Atg4bQ8BGE6 Gm10232-201ENSMUST00000089221 720 ntBASIC19.76■□□□□ 0.75
Atg4bQ8BGE6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4bQ8BGE6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4bQ8BGE6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg4bQ8BGE6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Atg4bQ8BGE6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg4bQ8BGE6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg4bQ8BGE6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg4bQ8BGE6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atg4bQ8BGE6 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.74■□□□□ 0.75
Atg4bQ8BGE6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.74■□□□□ 0.75
Atg4bQ8BGE6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.74■□□□□ 0.75
Atg4bQ8BGE6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.74■□□□□ 0.75
Atg4bQ8BGE6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg4bQ8BGE6 Gm5812-201ENSMUST00000061073 957 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 162.1 ms