Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Upk3bQ80YF6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Upk3bQ80YF6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bQ80YF6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bQ80YF6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bQ80YF6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bQ80YF6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bQ80YF6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Upk3bQ80YF6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bQ80YF6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bQ80YF6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bQ80YF6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bQ80YF6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.74■□□□□ 0.43
Upk3bQ80YF6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upk3bQ80YF6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upk3bQ80YF6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upk3bQ80YF6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Upk3bQ80YF6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk3bQ80YF6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk3bQ80YF6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Upk3bQ80YF6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk3bQ80YF6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk3bQ80YF6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Upk3bQ80YF6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk3bQ80YF6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk3bQ80YF6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk3bQ80YF6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk3bQ80YF6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk3bQ80YF6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Upk3bQ80YF6 Gm9806-201ENSMUST00000051080 552 ntBASIC17.72■□□□□ 0.43
Upk3bQ80YF6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.72■□□□□ 0.43
Upk3bQ80YF6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk3bQ80YF6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk3bQ80YF6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk3bQ80YF6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Upk3bQ80YF6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upk3bQ80YF6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upk3bQ80YF6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.71■□□□□ 0.43
Upk3bQ80YF6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upk3bQ80YF6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Upk3bQ80YF6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Upk3bQ80YF6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upk3bQ80YF6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Upk3bQ80YF6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Upk3bQ80YF6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Upk3bQ80YF6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Upk3bQ80YF6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk3bQ80YF6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk3bQ80YF6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.7■□□□□ 0.42
Upk3bQ80YF6 Scarna2-201ENSMUST00000157560 414 ntBASIC17.7■□□□□ 0.42
Upk3bQ80YF6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.7■□□□□ 0.42
Upk3bQ80YF6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk3bQ80YF6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Upk3bQ80YF6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Upk3bQ80YF6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.69■□□□□ 0.42
Upk3bQ80YF6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk3bQ80YF6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Upk3bQ80YF6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.69■□□□□ 0.42
Upk3bQ80YF6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Upk3bQ80YF6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk3bQ80YF6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk3bQ80YF6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk3bQ80YF6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk3bQ80YF6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk3bQ80YF6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Upk3bQ80YF6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.68■□□□□ 0.42
Upk3bQ80YF6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Upk3bQ80YF6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.68■□□□□ 0.42
Upk3bQ80YF6 Gm16437-201ENSMUST00000025669 507 ntBASIC17.68■□□□□ 0.42
Upk3bQ80YF6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk3bQ80YF6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Upk3bQ80YF6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk3bQ80YF6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Upk3bQ80YF6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk3bQ80YF6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.67■□□□□ 0.42
Upk3bQ80YF6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Upk3bQ80YF6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Upk3bQ80YF6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.67■□□□□ 0.42
Upk3bQ80YF6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk3bQ80YF6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk3bQ80YF6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Upk3bQ80YF6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Upk3bQ80YF6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk3bQ80YF6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.66■□□□□ 0.42
Upk3bQ80YF6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Upk3bQ80YF6 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.66■□□□□ 0.42
Upk3bQ80YF6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk3bQ80YF6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk3bQ80YF6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms