Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
ShprhQ7TPQ3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC30.67■■■□□ 2.5
ShprhQ7TPQ3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC30.66■■■□□ 2.5
ShprhQ7TPQ3 Gm6139-201ENSMUST00000079261 882 ntBASIC30.66■■■□□ 2.5
ShprhQ7TPQ3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC30.65■■■□□ 2.5
ShprhQ7TPQ3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
ShprhQ7TPQ3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ShprhQ7TPQ3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
ShprhQ7TPQ3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
ShprhQ7TPQ3 Gm9207-201ENSMUST00000198773 1115 ntBASIC30.65■■■□□ 2.5
ShprhQ7TPQ3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
ShprhQ7TPQ3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ShprhQ7TPQ3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
ShprhQ7TPQ3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ShprhQ7TPQ3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC30.63■■■□□ 2.49
ShprhQ7TPQ3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
ShprhQ7TPQ3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ShprhQ7TPQ3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ShprhQ7TPQ3 Gm18284-201ENSMUST00000172604 624 ntBASIC30.62■■■□□ 2.49
ShprhQ7TPQ3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
ShprhQ7TPQ3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
ShprhQ7TPQ3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
ShprhQ7TPQ3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ShprhQ7TPQ3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ShprhQ7TPQ3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
ShprhQ7TPQ3 Gm10657-201ENSMUST00000193528 1031 ntBASIC30.62■■■□□ 2.49
ShprhQ7TPQ3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
ShprhQ7TPQ3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ShprhQ7TPQ3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ShprhQ7TPQ3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
ShprhQ7TPQ3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
ShprhQ7TPQ3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC30.61■■■□□ 2.49
ShprhQ7TPQ3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ShprhQ7TPQ3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
ShprhQ7TPQ3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
ShprhQ7TPQ3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
ShprhQ7TPQ3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ShprhQ7TPQ3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
ShprhQ7TPQ3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ShprhQ7TPQ3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
ShprhQ7TPQ3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
ShprhQ7TPQ3 Gm9870-201ENSMUST00000063874 645 ntBASIC30.59■■■□□ 2.49
ShprhQ7TPQ3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
ShprhQ7TPQ3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ShprhQ7TPQ3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ShprhQ7TPQ3 Gm12251-201ENSMUST00000117893 792 ntBASIC30.58■■■□□ 2.49
ShprhQ7TPQ3 Gm43137-201ENSMUST00000198052 594 ntBASIC30.58■■■□□ 2.49
ShprhQ7TPQ3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ShprhQ7TPQ3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
ShprhQ7TPQ3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC30.58■■■□□ 2.49
ShprhQ7TPQ3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
ShprhQ7TPQ3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC30.58■■■□□ 2.49
ShprhQ7TPQ3 Gm43017-201ENSMUST00000198296 752 ntBASIC30.58■■■□□ 2.49
ShprhQ7TPQ3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
ShprhQ7TPQ3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
ShprhQ7TPQ3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
ShprhQ7TPQ3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ShprhQ7TPQ3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ShprhQ7TPQ3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ShprhQ7TPQ3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
ShprhQ7TPQ3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ShprhQ7TPQ3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC30.55■■■□□ 2.48
ShprhQ7TPQ3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ShprhQ7TPQ3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ShprhQ7TPQ3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC30.55■■■□□ 2.48
ShprhQ7TPQ3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ShprhQ7TPQ3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ShprhQ7TPQ3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ShprhQ7TPQ3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ShprhQ7TPQ3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC30.53■■■□□ 2.48
ShprhQ7TPQ3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
ShprhQ7TPQ3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
ShprhQ7TPQ3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ShprhQ7TPQ3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ShprhQ7TPQ3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ShprhQ7TPQ3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ShprhQ7TPQ3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
ShprhQ7TPQ3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
ShprhQ7TPQ3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
ShprhQ7TPQ3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
ShprhQ7TPQ3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
ShprhQ7TPQ3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ShprhQ7TPQ3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC30.5■■■□□ 2.47
ShprhQ7TPQ3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC30.5■■■□□ 2.47
ShprhQ7TPQ3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ShprhQ7TPQ3 Gm8770-201ENSMUST00000121113 1109 ntBASIC30.49■■■□□ 2.47
ShprhQ7TPQ3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
ShprhQ7TPQ3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
ShprhQ7TPQ3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
ShprhQ7TPQ3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
ShprhQ7TPQ3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
ShprhQ7TPQ3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
ShprhQ7TPQ3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
ShprhQ7TPQ3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC30.48■■■□□ 2.47
ShprhQ7TPQ3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ShprhQ7TPQ3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
ShprhQ7TPQ3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
ShprhQ7TPQ3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC30.47■■■□□ 2.47
ShprhQ7TPQ3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
ShprhQ7TPQ3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms