Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.66■■□□□ 1.06
Cspg5Q71M36 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cspg5Q71M36 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cspg5Q71M36 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cspg5Q71M36 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cspg5Q71M36 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cspg5Q71M36 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.65■■□□□ 1.06
Cspg5Q71M36 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cspg5Q71M36 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cspg5Q71M36 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cspg5Q71M36 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cspg5Q71M36 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cspg5Q71M36 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cspg5Q71M36 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.64■■□□□ 1.05
Cspg5Q71M36 Gm27454-201ENSMUST00000185090 204 ntBASIC21.64■■□□□ 1.05
Cspg5Q71M36 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cspg5Q71M36 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cspg5Q71M36 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cspg5Q71M36 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Cspg5Q71M36 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg5Q71M36 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg5Q71M36 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.63■■□□□ 1.05
Cspg5Q71M36 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg5Q71M36 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg5Q71M36 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg5Q71M36 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg5Q71M36 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg5Q71M36 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg5Q71M36 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cspg5Q71M36 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.62■■□□□ 1.05
Cspg5Q71M36 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg5Q71M36 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cspg5Q71M36 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.61■■□□□ 1.05
Cspg5Q71M36 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.61■■□□□ 1.05
Cspg5Q71M36 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cspg5Q71M36 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cspg5Q71M36 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cspg5Q71M36 Gm10399-202ENSMUST00000202768 748 ntBASIC21.6■■□□□ 1.05
Cspg5Q71M36 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cspg5Q71M36 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cspg5Q71M36 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cspg5Q71M36 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cspg5Q71M36 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.6■■□□□ 1.05
Cspg5Q71M36 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cspg5Q71M36 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Cspg5Q71M36 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cspg5Q71M36 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cspg5Q71M36 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.59■■□□□ 1.05
Cspg5Q71M36 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cspg5Q71M36 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cspg5Q71M36 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cspg5Q71M36 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cspg5Q71M36 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cspg5Q71M36 Gm12821-201ENSMUST00000120022 600 ntBASIC21.58■■□□□ 1.05
Cspg5Q71M36 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cspg5Q71M36 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cspg5Q71M36 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cspg5Q71M36 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.57■■□□□ 1.04
Cspg5Q71M36 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
Cspg5Q71M36 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cspg5Q71M36 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.57■■□□□ 1.04
Cspg5Q71M36 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.56■■□□□ 1.04
Cspg5Q71M36 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cspg5Q71M36 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cspg5Q71M36 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cspg5Q71M36 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cspg5Q71M36 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.55■■□□□ 1.04
Cspg5Q71M36 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Gm12922-201ENSMUST00000120626 809 ntBASIC21.54■■□□□ 1.04
Cspg5Q71M36 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cspg5Q71M36 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cspg5Q71M36 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.53■■□□□ 1.04
Cspg5Q71M36 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cspg5Q71M36 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cspg5Q71M36 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cspg5Q71M36 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cspg5Q71M36 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms