Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rif1Q6PR54 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rif1Q6PR54 Gm10653-202ENSMUST00000139570 835 ntBASIC18.07■□□□□ 0.48
Rif1Q6PR54 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rif1Q6PR54 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rif1Q6PR54 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.07■□□□□ 0.48
Rif1Q6PR54 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rif1Q6PR54 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rif1Q6PR54 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.06■□□□□ 0.48
Rif1Q6PR54 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rif1Q6PR54 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rif1Q6PR54 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.06■□□□□ 0.48
Rif1Q6PR54 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.06■□□□□ 0.48
Rif1Q6PR54 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rif1Q6PR54 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rif1Q6PR54 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.05■□□□□ 0.48
Rif1Q6PR54 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rif1Q6PR54 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rif1Q6PR54 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Rif1Q6PR54 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rif1Q6PR54 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rif1Q6PR54 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.04■□□□□ 0.48
Rif1Q6PR54 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.04■□□□□ 0.48
Rif1Q6PR54 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rif1Q6PR54 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rif1Q6PR54 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rif1Q6PR54 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rif1Q6PR54 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.03■□□□□ 0.48
Rif1Q6PR54 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rif1Q6PR54 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rif1Q6PR54 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rif1Q6PR54 Gm18671-201ENSMUST00000214826 683 ntBASIC18.03■□□□□ 0.48
Rif1Q6PR54 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rif1Q6PR54 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rif1Q6PR54 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rif1Q6PR54 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rif1Q6PR54 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rif1Q6PR54 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Rif1Q6PR54 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rif1Q6PR54 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rif1Q6PR54 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rif1Q6PR54 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rif1Q6PR54 Mir6982-201ENSMUST00000184354 68 ntBASIC18.01■□□□□ 0.47
Rif1Q6PR54 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.01■□□□□ 0.47
Rif1Q6PR54 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rif1Q6PR54 Gm12527-201ENSMUST00000117967 564 ntBASIC18.01■□□□□ 0.47
Rif1Q6PR54 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rif1Q6PR54 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rif1Q6PR54 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rif1Q6PR54 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18■□□□□ 0.47
Rif1Q6PR54 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18■□□□□ 0.47
Rif1Q6PR54 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rif1Q6PR54 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rif1Q6PR54 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rif1Q6PR54 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rif1Q6PR54 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rif1Q6PR54 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Rif1Q6PR54 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rif1Q6PR54 Gm20760-201ENSMUST00000179197 648 ntBASIC17.99■□□□□ 0.47
Rif1Q6PR54 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rif1Q6PR54 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rif1Q6PR54 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.98■□□□□ 0.47
Rif1Q6PR54 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.98■□□□□ 0.47
Rif1Q6PR54 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rif1Q6PR54 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rif1Q6PR54 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.98■□□□□ 0.47
Rif1Q6PR54 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rif1Q6PR54 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rif1Q6PR54 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rif1Q6PR54 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rif1Q6PR54 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rif1Q6PR54 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rif1Q6PR54 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rif1Q6PR54 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.96■□□□□ 0.47
Rif1Q6PR54 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.96■□□□□ 0.47
Rif1Q6PR54 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rif1Q6PR54 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rif1Q6PR54 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Rif1Q6PR54 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rif1Q6PR54 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rif1Q6PR54 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rif1Q6PR54 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.95■□□□□ 0.46
Rif1Q6PR54 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.94■□□□□ 0.46
Rif1Q6PR54 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.94■□□□□ 0.46
Rif1Q6PR54 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rif1Q6PR54 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rif1Q6PR54 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rif1Q6PR54 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Rif1Q6PR54 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rif1Q6PR54 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.94■□□□□ 0.46
Rif1Q6PR54 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rif1Q6PR54 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.94■□□□□ 0.46
Rif1Q6PR54 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.94■□□□□ 0.46
Rif1Q6PR54 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rif1Q6PR54 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.93■□□□□ 0.46
Rif1Q6PR54 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.93■□□□□ 0.46
Rif1Q6PR54 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rif1Q6PR54 Amer2-203ENSMUST00000225247 2662 ntBASIC17.93■□□□□ 0.46
Rif1Q6PR54 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rif1Q6PR54 Gm8520-201ENSMUST00000186517 868 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms