Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Snrnp40Q6PE01 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp40Q6PE01 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp40Q6PE01 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Snrnp40Q6PE01 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp40Q6PE01 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp40Q6PE01 Mir7075-201ENSMUST00000184187 82 ntBASIC18.72■□□□□ 0.59
Snrnp40Q6PE01 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.72■□□□□ 0.59
Snrnp40Q6PE01 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.72■□□□□ 0.59
Snrnp40Q6PE01 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp40Q6PE01 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp40Q6PE01 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Snrnp40Q6PE01 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp40Q6PE01 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp40Q6PE01 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp40Q6PE01 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.71■□□□□ 0.59
Snrnp40Q6PE01 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.71■□□□□ 0.59
Snrnp40Q6PE01 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Snrnp40Q6PE01 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Snrnp40Q6PE01 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Snrnp40Q6PE01 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.7■□□□□ 0.58
Snrnp40Q6PE01 Gm43017-201ENSMUST00000198296 752 ntBASIC18.7■□□□□ 0.58
Snrnp40Q6PE01 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snrnp40Q6PE01 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.7■□□□□ 0.58
Snrnp40Q6PE01 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snrnp40Q6PE01 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snrnp40Q6PE01 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Snrnp40Q6PE01 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Snrnp40Q6PE01 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snrnp40Q6PE01 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snrnp40Q6PE01 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snrnp40Q6PE01 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snrnp40Q6PE01 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Snrnp40Q6PE01 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Snrnp40Q6PE01 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snrnp40Q6PE01 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snrnp40Q6PE01 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.67■□□□□ 0.58
Snrnp40Q6PE01 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Snrnp40Q6PE01 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Snrnp40Q6PE01 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Snrnp40Q6PE01 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Snrnp40Q6PE01 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.67■□□□□ 0.58
Snrnp40Q6PE01 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snrnp40Q6PE01 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snrnp40Q6PE01 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Snrnp40Q6PE01 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.66■□□□□ 0.58
Snrnp40Q6PE01 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.66■□□□□ 0.58
Snrnp40Q6PE01 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.66■□□□□ 0.58
Snrnp40Q6PE01 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snrnp40Q6PE01 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snrnp40Q6PE01 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Snrnp40Q6PE01 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Snrnp40Q6PE01 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
Snrnp40Q6PE01 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snrnp40Q6PE01 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Snrnp40Q6PE01 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Snrnp40Q6PE01 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snrnp40Q6PE01 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Snrnp40Q6PE01 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Snrnp40Q6PE01 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Snrnp40Q6PE01 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.64■□□□□ 0.58
Snrnp40Q6PE01 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.64■□□□□ 0.57
Snrnp40Q6PE01 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snrnp40Q6PE01 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snrnp40Q6PE01 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Snrnp40Q6PE01 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Snrnp40Q6PE01 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snrnp40Q6PE01 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Snrnp40Q6PE01 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snrnp40Q6PE01 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Snrnp40Q6PE01 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snrnp40Q6PE01 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snrnp40Q6PE01 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.63■□□□□ 0.57
Snrnp40Q6PE01 Gm8493-201ENSMUST00000196881 489 ntBASIC18.63■□□□□ 0.57
Snrnp40Q6PE01 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.63■□□□□ 0.57
Snrnp40Q6PE01 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snrnp40Q6PE01 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snrnp40Q6PE01 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Snrnp40Q6PE01 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Snrnp40Q6PE01 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Snrnp40Q6PE01 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snrnp40Q6PE01 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snrnp40Q6PE01 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Snrnp40Q6PE01 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
Snrnp40Q6PE01 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snrnp40Q6PE01 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snrnp40Q6PE01 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Snrnp40Q6PE01 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms