Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Usp50Q6P8X6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Usp50Q6P8X6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Usp50Q6P8X6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.44■■□□□ 1.5
Usp50Q6P8X6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Usp50Q6P8X6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Usp50Q6P8X6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Usp50Q6P8X6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.43■■□□□ 1.5
Usp50Q6P8X6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.43■■□□□ 1.5
Usp50Q6P8X6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Usp50Q6P8X6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Usp50Q6P8X6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Usp50Q6P8X6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.42■■□□□ 1.5
Usp50Q6P8X6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Usp50Q6P8X6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.41■■□□□ 1.5
Usp50Q6P8X6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Usp50Q6P8X6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Usp50Q6P8X6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Usp50Q6P8X6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.41■■□□□ 1.5
Usp50Q6P8X6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Usp50Q6P8X6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Usp50Q6P8X6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Usp50Q6P8X6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Usp50Q6P8X6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Usp50Q6P8X6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Usp50Q6P8X6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Usp50Q6P8X6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Usp50Q6P8X6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Usp50Q6P8X6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Usp50Q6P8X6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Usp50Q6P8X6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Usp50Q6P8X6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Usp50Q6P8X6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
Usp50Q6P8X6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Usp50Q6P8X6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.38■■□□□ 1.49
Usp50Q6P8X6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Usp50Q6P8X6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Usp50Q6P8X6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Usp50Q6P8X6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Usp50Q6P8X6 Gm22238-201ENSMUST00000175222 88 ntBASIC24.38■■□□□ 1.49
Usp50Q6P8X6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Usp50Q6P8X6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Usp50Q6P8X6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Usp50Q6P8X6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.37■■□□□ 1.49
Usp50Q6P8X6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Usp50Q6P8X6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.37■■□□□ 1.49
Usp50Q6P8X6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Usp50Q6P8X6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Usp50Q6P8X6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
Usp50Q6P8X6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Usp50Q6P8X6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Usp50Q6P8X6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.36■■□□□ 1.49
Usp50Q6P8X6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.36■■□□□ 1.49
Usp50Q6P8X6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Usp50Q6P8X6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Usp50Q6P8X6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Usp50Q6P8X6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.35■■□□□ 1.49
Usp50Q6P8X6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.35■■□□□ 1.49
Usp50Q6P8X6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.35■■□□□ 1.49
Usp50Q6P8X6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Usp50Q6P8X6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.34■■□□□ 1.49
Usp50Q6P8X6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Usp50Q6P8X6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.33■■□□□ 1.49
Usp50Q6P8X6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Usp50Q6P8X6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
Usp50Q6P8X6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Usp50Q6P8X6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Usp50Q6P8X6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Usp50Q6P8X6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Usp50Q6P8X6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Usp50Q6P8X6 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.32■■□□□ 1.48
Usp50Q6P8X6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp50Q6P8X6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Usp50Q6P8X6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp50Q6P8X6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Usp50Q6P8X6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Usp50Q6P8X6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Usp50Q6P8X6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Usp50Q6P8X6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Usp50Q6P8X6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Usp50Q6P8X6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.31■■□□□ 1.48
Usp50Q6P8X6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.31■■□□□ 1.48
Usp50Q6P8X6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Usp50Q6P8X6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp50Q6P8X6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Usp50Q6P8X6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Usp50Q6P8X6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp50Q6P8X6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp50Q6P8X6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp50Q6P8X6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Usp50Q6P8X6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Usp50Q6P8X6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp50Q6P8X6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp50Q6P8X6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp50Q6P8X6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Usp50Q6P8X6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Usp50Q6P8X6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Usp50Q6P8X6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Usp50Q6P8X6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Usp50Q6P8X6 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms