Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Col11a2Q64739 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col11a2Q64739 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col11a2Q64739 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col11a2Q64739 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.3■■□□□ 1.8
Col11a2Q64739 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col11a2Q64739 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC26.3■■□□□ 1.8
Col11a2Q64739 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Col11a2Q64739 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col11a2Q64739 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
Col11a2Q64739 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col11a2Q64739 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Col11a2Q64739 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Col11a2Q64739 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col11a2Q64739 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Col11a2Q64739 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Col11a2Q64739 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col11a2Q64739 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col11a2Q64739 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Col11a2Q64739 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC26.28■■□□□ 1.8
Col11a2Q64739 Krt8-ps-201ENSMUST00000208495 945 ntBASIC26.28■■□□□ 1.8
Col11a2Q64739 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC26.28■■□□□ 1.8
Col11a2Q64739 Gm9870-201ENSMUST00000063874 645 ntBASIC26.28■■□□□ 1.8
Col11a2Q64739 Gm5874-201ENSMUST00000096101 508 ntBASIC26.28■■□□□ 1.8
Col11a2Q64739 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col11a2Q64739 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col11a2Q64739 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col11a2Q64739 Gm8770-201ENSMUST00000121113 1109 ntBASIC26.28■■□□□ 1.8
Col11a2Q64739 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.28■■□□□ 1.8
Col11a2Q64739 Gm10657-201ENSMUST00000193528 1031 ntBASIC26.27■■□□□ 1.8
Col11a2Q64739 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Col11a2Q64739 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC26.26■■□□□ 1.79
Col11a2Q64739 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Col11a2Q64739 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col11a2Q64739 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Col11a2Q64739 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Col11a2Q64739 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col11a2Q64739 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
Col11a2Q64739 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.25■■□□□ 1.79
Col11a2Q64739 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Col11a2Q64739 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col11a2Q64739 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col11a2Q64739 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col11a2Q64739 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col11a2Q64739 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col11a2Q64739 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col11a2Q64739 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col11a2Q64739 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Col11a2Q64739 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col11a2Q64739 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Col11a2Q64739 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC26.23■■□□□ 1.79
Col11a2Q64739 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Col11a2Q64739 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col11a2Q64739 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col11a2Q64739 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC26.22■■□□□ 1.79
Col11a2Q64739 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col11a2Q64739 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.22■■□□□ 1.79
Col11a2Q64739 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Col11a2Q64739 Gm8493-201ENSMUST00000196881 489 ntBASIC26.22■■□□□ 1.79
Col11a2Q64739 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Col11a2Q64739 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Col11a2Q64739 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC26.21■■□□□ 1.79
Col11a2Q64739 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Col11a2Q64739 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col11a2Q64739 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col11a2Q64739 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Col11a2Q64739 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col11a2Q64739 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.21■■□□□ 1.79
Col11a2Q64739 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Col11a2Q64739 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col11a2Q64739 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Col11a2Q64739 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col11a2Q64739 Gm7291-201ENSMUST00000199147 382 ntBASIC26.19■■□□□ 1.78
Col11a2Q64739 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Col11a2Q64739 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.19■■□□□ 1.78
Col11a2Q64739 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col11a2Q64739 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col11a2Q64739 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC26.19■■□□□ 1.78
Col11a2Q64739 Wdr70-203ENSMUST00000227371 1130 ntBASIC26.19■■□□□ 1.78
Col11a2Q64739 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col11a2Q64739 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col11a2Q64739 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Col11a2Q64739 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col11a2Q64739 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col11a2Q64739 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC26.18■■□□□ 1.78
Col11a2Q64739 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC26.17■■□□□ 1.78
Col11a2Q64739 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC26.17■■□□□ 1.78
Col11a2Q64739 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col11a2Q64739 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC26.16■■□□□ 1.78
Col11a2Q64739 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC26.16■■□□□ 1.78
Col11a2Q64739 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC26.16■■□□□ 1.78
Col11a2Q64739 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Col11a2Q64739 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC26.16■■□□□ 1.78
Col11a2Q64739 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC26.16■■□□□ 1.78
Col11a2Q64739 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC26.16■■□□□ 1.78
Col11a2Q64739 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col11a2Q64739 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col11a2Q64739 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Col11a2Q64739 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col11a2Q64739 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms