Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Rai1Q61818 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rai1Q61818 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
Rai1Q61818 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.69■□□□□ 0.9
Rai1Q61818 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rai1Q61818 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rai1Q61818 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rai1Q61818 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.68■□□□□ 0.9
Rai1Q61818 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rai1Q61818 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.68■□□□□ 0.9
Rai1Q61818 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rai1Q61818 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rai1Q61818 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rai1Q61818 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rai1Q61818 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rai1Q61818 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rai1Q61818 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.67■□□□□ 0.9
Rai1Q61818 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.67■□□□□ 0.9
Rai1Q61818 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rai1Q61818 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rai1Q61818 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.67■□□□□ 0.9
Rai1Q61818 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rai1Q61818 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rai1Q61818 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.67■□□□□ 0.9
Rai1Q61818 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rai1Q61818 Gm18284-201ENSMUST00000172604 624 ntBASIC20.67■□□□□ 0.9
Rai1Q61818 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rai1Q61818 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rai1Q61818 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rai1Q61818 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rai1Q61818 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rai1Q61818 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rai1Q61818 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.66■□□□□ 0.9
Rai1Q61818 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rai1Q61818 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Rai1Q61818 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.66■□□□□ 0.9
Rai1Q61818 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.66■□□□□ 0.9
Rai1Q61818 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rai1Q61818 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rai1Q61818 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rai1Q61818 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rai1Q61818 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rai1Q61818 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rai1Q61818 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Rai1Q61818 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rai1Q61818 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rai1Q61818 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rai1Q61818 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rai1Q61818 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rai1Q61818 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rai1Q61818 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rai1Q61818 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.64■□□□□ 0.89
Rai1Q61818 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.64■□□□□ 0.89
Rai1Q61818 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.64■□□□□ 0.89
Rai1Q61818 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rai1Q61818 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rai1Q61818 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rai1Q61818 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rai1Q61818 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rai1Q61818 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rai1Q61818 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.62■□□□□ 0.89
Rai1Q61818 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rai1Q61818 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rai1Q61818 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.62■□□□□ 0.89
Rai1Q61818 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rai1Q61818 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rai1Q61818 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rai1Q61818 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rai1Q61818 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rai1Q61818 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rai1Q61818 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rai1Q61818 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Rai1Q61818 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rai1Q61818 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rai1Q61818 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rai1Q61818 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rai1Q61818 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rai1Q61818 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rai1Q61818 Gm43017-201ENSMUST00000198296 752 ntBASIC20.6■□□□□ 0.89
Rai1Q61818 Gm6139-201ENSMUST00000079261 882 ntBASIC20.6■□□□□ 0.89
Rai1Q61818 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.59■□□□□ 0.89
Rai1Q61818 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Rai1Q61818 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.59■□□□□ 0.89
Rai1Q61818 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rai1Q61818 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Rai1Q61818 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.59■□□□□ 0.89
Rai1Q61818 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rai1Q61818 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rai1Q61818 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rai1Q61818 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rai1Q61818 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rai1Q61818 Gm43137-201ENSMUST00000198052 594 ntBASIC20.58■□□□□ 0.89
Rai1Q61818 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rai1Q61818 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rai1Q61818 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rai1Q61818 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rai1Q61818 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rai1Q61818 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rai1Q61818 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rai1Q61818 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms