Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Itm2aQ61500 Gm6311-201ENSMUST00000073790 878 ntBASIC20.69■□□□□ 0.9
Itm2aQ61500 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.69■□□□□ 0.9
Itm2aQ61500 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Itm2aQ61500 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itm2aQ61500 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Itm2aQ61500 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Itm2aQ61500 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itm2aQ61500 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itm2aQ61500 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itm2aQ61500 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Itm2aQ61500 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Itm2aQ61500 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.68■□□□□ 0.9
Itm2aQ61500 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itm2aQ61500 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itm2aQ61500 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itm2aQ61500 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Itm2aQ61500 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itm2aQ61500 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.67■□□□□ 0.9
Itm2aQ61500 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itm2aQ61500 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Itm2aQ61500 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Itm2aQ61500 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Itm2aQ61500 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itm2aQ61500 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itm2aQ61500 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Itm2aQ61500 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Itm2aQ61500 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itm2aQ61500 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.66■□□□□ 0.9
Itm2aQ61500 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Itm2aQ61500 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Itm2aQ61500 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Itm2aQ61500 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itm2aQ61500 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.65■□□□□ 0.9
Itm2aQ61500 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Itm2aQ61500 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Itm2aQ61500 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Itm2aQ61500 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Itm2aQ61500 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Itm2aQ61500 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Itm2aQ61500 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Itm2aQ61500 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Itm2aQ61500 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.63■□□□□ 0.89
Itm2aQ61500 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itm2aQ61500 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Itm2aQ61500 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
Itm2aQ61500 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.63■□□□□ 0.89
Itm2aQ61500 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Itm2aQ61500 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itm2aQ61500 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Itm2aQ61500 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Itm2aQ61500 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Itm2aQ61500 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.63■□□□□ 0.89
Itm2aQ61500 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Itm2aQ61500 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Itm2aQ61500 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itm2aQ61500 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itm2aQ61500 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itm2aQ61500 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Itm2aQ61500 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Itm2aQ61500 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itm2aQ61500 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Itm2aQ61500 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.61■□□□□ 0.89
Itm2aQ61500 Gm16437-201ENSMUST00000025669 507 ntBASIC20.61■□□□□ 0.89
Itm2aQ61500 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Itm2aQ61500 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Itm2aQ61500 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Itm2aQ61500 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itm2aQ61500 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itm2aQ61500 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.6■□□□□ 0.89
Itm2aQ61500 Scarna2-201ENSMUST00000157560 414 ntBASIC20.6■□□□□ 0.89
Itm2aQ61500 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Itm2aQ61500 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Itm2aQ61500 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Itm2aQ61500 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.59■□□□□ 0.89
Itm2aQ61500 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Itm2aQ61500 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Itm2aQ61500 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Itm2aQ61500 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Itm2aQ61500 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Itm2aQ61500 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Itm2aQ61500 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Itm2aQ61500 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Itm2aQ61500 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Itm2aQ61500 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itm2aQ61500 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itm2aQ61500 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Itm2aQ61500 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Itm2aQ61500 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itm2aQ61500 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itm2aQ61500 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itm2aQ61500 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itm2aQ61500 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itm2aQ61500 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itm2aQ61500 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Itm2aQ61500 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Itm2aQ61500 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Itm2aQ61500 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Itm2aQ61500 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Itm2aQ61500 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms