Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox17Q61473 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox17Q61473 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox17Q61473 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox17Q61473 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox17Q61473 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox17Q61473 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox17Q61473 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox17Q61473 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox17Q61473 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox17Q61473 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.69■□□□□ 0.74
Sox17Q61473 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.69■□□□□ 0.74
Sox17Q61473 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox17Q61473 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sox17Q61473 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sox17Q61473 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox17Q61473 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Sox17Q61473 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sox17Q61473 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox17Q61473 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.68■□□□□ 0.74
Sox17Q61473 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox17Q61473 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox17Q61473 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox17Q61473 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sox17Q61473 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox17Q61473 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox17Q61473 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox17Q61473 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox17Q61473 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox17Q61473 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox17Q61473 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox17Q61473 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox17Q61473 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sox17Q61473 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox17Q61473 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Sox17Q61473 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox17Q61473 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox17Q61473 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sox17Q61473 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sox17Q61473 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox17Q61473 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox17Q61473 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox17Q61473 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sox17Q61473 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox17Q61473 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sox17Q61473 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox17Q61473 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Sox17Q61473 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sox17Q61473 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.64■□□□□ 0.74
Sox17Q61473 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sox17Q61473 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Sox17Q61473 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sox17Q61473 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox17Q61473 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
Sox17Q61473 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox17Q61473 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.64■□□□□ 0.73
Sox17Q61473 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Sox17Q61473 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Sox17Q61473 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.64■□□□□ 0.73
Sox17Q61473 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox17Q61473 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sox17Q61473 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox17Q61473 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox17Q61473 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox17Q61473 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox17Q61473 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox17Q61473 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sox17Q61473 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sox17Q61473 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox17Q61473 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sox17Q61473 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox17Q61473 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Sox17Q61473 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox17Q61473 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox17Q61473 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox17Q61473 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.62■□□□□ 0.73
Sox17Q61473 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox17Q61473 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox17Q61473 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox17Q61473 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sox17Q61473 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox17Q61473 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox17Q61473 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox17Q61473 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Sox17Q61473 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox17Q61473 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox17Q61473 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.61■□□□□ 0.73
Sox17Q61473 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox17Q61473 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox17Q61473 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sox17Q61473 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox17Q61473 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox17Q61473 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Sox17Q61473 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox17Q61473 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox17Q61473 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox17Q61473 Gm11599-201ENSMUST00000118720 878 ntBASIC19.6■□□□□ 0.73
Sox17Q61473 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.6■□□□□ 0.73
Sox17Q61473 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox17Q61473 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms