Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h4Q60641 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h4Q60641 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h4Q60641 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Nr1h4Q60641 Gm9806-201ENSMUST00000051080 552 ntBASIC19.98■□□□□ 0.79
Nr1h4Q60641 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h4Q60641 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nr1h4Q60641 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h4Q60641 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h4Q60641 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nr1h4Q60641 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h4Q60641 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Nr1h4Q60641 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h4Q60641 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h4Q60641 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.96■□□□□ 0.79
Nr1h4Q60641 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h4Q60641 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nr1h4Q60641 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.95■□□□□ 0.78
Nr1h4Q60641 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h4Q60641 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h4Q60641 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h4Q60641 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h4Q60641 Scarna2-201ENSMUST00000157560 414 ntBASIC19.95■□□□□ 0.78
Nr1h4Q60641 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h4Q60641 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Nr1h4Q60641 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h4Q60641 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nr1h4Q60641 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h4Q60641 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h4Q60641 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.94■□□□□ 0.78
Nr1h4Q60641 Gm16437-201ENSMUST00000025669 507 ntBASIC19.94■□□□□ 0.78
Nr1h4Q60641 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Nr1h4Q60641 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nr1h4Q60641 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h4Q60641 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h4Q60641 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h4Q60641 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Nr1h4Q60641 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nr1h4Q60641 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h4Q60641 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h4Q60641 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Nr1h4Q60641 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h4Q60641 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h4Q60641 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
Nr1h4Q60641 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h4Q60641 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.93■□□□□ 0.78
Nr1h4Q60641 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h4Q60641 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nr1h4Q60641 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h4Q60641 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h4Q60641 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h4Q60641 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h4Q60641 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h4Q60641 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h4Q60641 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h4Q60641 Notumos-201ENSMUST00000151998 2659 ntBASIC19.92■□□□□ 0.78
Nr1h4Q60641 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h4Q60641 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nr1h4Q60641 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Nr1h4Q60641 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Nr1h4Q60641 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h4Q60641 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h4Q60641 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h4Q60641 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.91■□□□□ 0.78
Nr1h4Q60641 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nr1h4Q60641 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.91■□□□□ 0.78
Nr1h4Q60641 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h4Q60641 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h4Q60641 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h4Q60641 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h4Q60641 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h4Q60641 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h4Q60641 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h4Q60641 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nr1h4Q60641 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.9■□□□□ 0.78
Nr1h4Q60641 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h4Q60641 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h4Q60641 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h4Q60641 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h4Q60641 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h4Q60641 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h4Q60641 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h4Q60641 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nr1h4Q60641 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h4Q60641 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h4Q60641 Gm11687-201ENSMUST00000118911 886 ntBASIC19.88■□□□□ 0.77
Nr1h4Q60641 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.88■□□□□ 0.77
Nr1h4Q60641 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h4Q60641 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nr1h4Q60641 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Nr1h4Q60641 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h4Q60641 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h4Q60641 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h4Q60641 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h4Q60641 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nr1h4Q60641 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1h4Q60641 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.87■□□□□ 0.77
Nr1h4Q60641 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.87■□□□□ 0.77
Nr1h4Q60641 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.87■□□□□ 0.77
Nr1h4Q60641 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms