Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trp53rkaQ5U452 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trp53rkaQ5U452 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trp53rkaQ5U452 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trp53rkaQ5U452 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trp53rkaQ5U452 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trp53rkaQ5U452 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trp53rkaQ5U452 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trp53rkaQ5U452 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trp53rkaQ5U452 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trp53rkaQ5U452 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trp53rkaQ5U452 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trp53rkaQ5U452 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trp53rkaQ5U452 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trp53rkaQ5U452 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trp53rkaQ5U452 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.45■□□□□ 0.22
Trp53rkaQ5U452 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.45■□□□□ 0.22
Trp53rkaQ5U452 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.45■□□□□ 0.22
Trp53rkaQ5U452 Golph3-202ENSMUST00000226517 2359 ntBASIC16.45■□□□□ 0.22
Trp53rkaQ5U452 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trp53rkaQ5U452 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trp53rkaQ5U452 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trp53rkaQ5U452 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.44■□□□□ 0.22
Trp53rkaQ5U452 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trp53rkaQ5U452 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Trp53rkaQ5U452 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trp53rkaQ5U452 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trp53rkaQ5U452 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trp53rkaQ5U452 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trp53rkaQ5U452 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trp53rkaQ5U452 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trp53rkaQ5U452 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trp53rkaQ5U452 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trp53rkaQ5U452 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trp53rkaQ5U452 Gm6821-201ENSMUST00000107540 542 ntBASIC16.43■□□□□ 0.22
Trp53rkaQ5U452 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trp53rkaQ5U452 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trp53rkaQ5U452 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trp53rkaQ5U452 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Trp53rkaQ5U452 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trp53rkaQ5U452 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trp53rkaQ5U452 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trp53rkaQ5U452 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trp53rkaQ5U452 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trp53rkaQ5U452 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trp53rkaQ5U452 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trp53rkaQ5U452 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trp53rkaQ5U452 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trp53rkaQ5U452 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trp53rkaQ5U452 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trp53rkaQ5U452 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trp53rkaQ5U452 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trp53rkaQ5U452 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trp53rkaQ5U452 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trp53rkaQ5U452 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trp53rkaQ5U452 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trp53rkaQ5U452 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trp53rkaQ5U452 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trp53rkaQ5U452 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.38■□□□□ 0.21
Trp53rkaQ5U452 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trp53rkaQ5U452 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trp53rkaQ5U452 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trp53rkaQ5U452 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms