Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ubr3Q5U430 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.37■■□□□ 1.81
Ubr3Q5U430 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Ubr3Q5U430 Gm9870-201ENSMUST00000063874 645 ntBASIC26.36■■□□□ 1.81
Ubr3Q5U430 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ubr3Q5U430 AC158990.1-201ENSMUST00000221450 2016 ntBASIC26.36■■□□□ 1.81
Ubr3Q5U430 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ubr3Q5U430 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ubr3Q5U430 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ubr3Q5U430 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ubr3Q5U430 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ubr3Q5U430 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
Ubr3Q5U430 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.35■■□□□ 1.81
Ubr3Q5U430 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Ubr3Q5U430 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.35■■□□□ 1.81
Ubr3Q5U430 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ubr3Q5U430 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ubr3Q5U430 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ubr3Q5U430 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Ubr3Q5U430 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ubr3Q5U430 Gm8770-201ENSMUST00000121113 1109 ntBASIC26.34■■□□□ 1.81
Ubr3Q5U430 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC26.34■■□□□ 1.81
Ubr3Q5U430 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ubr3Q5U430 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ubr3Q5U430 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ubr3Q5U430 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ubr3Q5U430 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ubr3Q5U430 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC26.32■■□□□ 1.8
Ubr3Q5U430 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ubr3Q5U430 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC26.32■■□□□ 1.8
Ubr3Q5U430 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ubr3Q5U430 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ubr3Q5U430 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ubr3Q5U430 Gm5874-201ENSMUST00000096101 508 ntBASIC26.31■■□□□ 1.8
Ubr3Q5U430 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ubr3Q5U430 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ubr3Q5U430 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ubr3Q5U430 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC26.3■■□□□ 1.8
Ubr3Q5U430 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC26.3■■□□□ 1.8
Ubr3Q5U430 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ubr3Q5U430 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ubr3Q5U430 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ubr3Q5U430 Wdr70-203ENSMUST00000227371 1130 ntBASIC26.3■■□□□ 1.8
Ubr3Q5U430 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Ubr3Q5U430 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr3Q5U430 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Ubr3Q5U430 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr3Q5U430 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr3Q5U430 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ubr3Q5U430 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr3Q5U430 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.28■■□□□ 1.8
Ubr3Q5U430 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC26.28■■□□□ 1.8
Ubr3Q5U430 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr3Q5U430 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr3Q5U430 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr3Q5U430 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Ubr3Q5U430 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr3Q5U430 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr3Q5U430 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr3Q5U430 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr3Q5U430 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ubr3Q5U430 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ubr3Q5U430 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ubr3Q5U430 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ubr3Q5U430 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.27■■□□□ 1.8
Ubr3Q5U430 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC26.27■■□□□ 1.8
Ubr3Q5U430 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ubr3Q5U430 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ubr3Q5U430 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ubr3Q5U430 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC26.27■■□□□ 1.8
Ubr3Q5U430 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ubr3Q5U430 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Ubr3Q5U430 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ubr3Q5U430 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC26.26■■□□□ 1.79
Ubr3Q5U430 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ubr3Q5U430 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr3Q5U430 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC26.25■■□□□ 1.79
Ubr3Q5U430 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Ubr3Q5U430 Gm8493-201ENSMUST00000196881 489 ntBASIC26.25■■□□□ 1.79
Ubr3Q5U430 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr3Q5U430 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr3Q5U430 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.25■■□□□ 1.79
Ubr3Q5U430 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr3Q5U430 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC26.25■■□□□ 1.79
Ubr3Q5U430 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ubr3Q5U430 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Ubr3Q5U430 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
Ubr3Q5U430 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ubr3Q5U430 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Ubr3Q5U430 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ubr3Q5U430 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ubr3Q5U430 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ubr3Q5U430 Gm7291-201ENSMUST00000199147 382 ntBASIC26.23■■□□□ 1.79
Ubr3Q5U430 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC26.23■■□□□ 1.79
Ubr3Q5U430 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC26.22■■□□□ 1.79
Ubr3Q5U430 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ubr3Q5U430 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ubr3Q5U430 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC26.22■■□□□ 1.79
Ubr3Q5U430 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ubr3Q5U430 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms