Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trav7d-4Q5R1H9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7d-4Q5R1H9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16■□□□□ 0.15
Trav7d-4Q5R1H9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav7d-4Q5R1H9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7d-4Q5R1H9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav7d-4Q5R1H9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav7d-4Q5R1H9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.99■□□□□ 0.15
Trav7d-4Q5R1H9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7d-4Q5R1H9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7d-4Q5R1H9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7d-4Q5R1H9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7d-4Q5R1H9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.99■□□□□ 0.15
Trav7d-4Q5R1H9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7d-4Q5R1H9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7d-4Q5R1H9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7d-4Q5R1H9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7d-4Q5R1H9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-4Q5R1H9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-4Q5R1H9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-4Q5R1H9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-4Q5R1H9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-4Q5R1H9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-4Q5R1H9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav7d-4Q5R1H9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-4Q5R1H9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7d-4Q5R1H9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav7d-4Q5R1H9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7d-4Q5R1H9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
Trav7d-4Q5R1H9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav7d-4Q5R1H9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav7d-4Q5R1H9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav7d-4Q5R1H9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7d-4Q5R1H9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7d-4Q5R1H9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav7d-4Q5R1H9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-4Q5R1H9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav7d-4Q5R1H9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-4Q5R1H9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-4Q5R1H9 Tdp2-203ENSMUST00000223804 1136 ntBASIC15.95■□□□□ 0.14
Trav7d-4Q5R1H9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-4Q5R1H9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7d-4Q5R1H9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Nkain2-201ENSMUST00000092602 558 ntBASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7d-4Q5R1H9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Gm45855-201ENSMUST00000212546 880 ntBASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Trav7d-4Q5R1H9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-4Q5R1H9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav7d-4Q5R1H9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-4Q5R1H9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav7d-4Q5R1H9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-4Q5R1H9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav7d-4Q5R1H9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-4Q5R1H9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7d-4Q5R1H9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7d-4Q5R1H9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7d-4Q5R1H9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav7d-4Q5R1H9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7d-4Q5R1H9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7d-4Q5R1H9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7d-4Q5R1H9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms