Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.89■□□□□ 0.3
Trav6-3Q5R1E6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Trav6-3Q5R1E6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 Gm7332-201ENSMUST00000118351 454 ntBASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-3Q5R1E6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-3Q5R1E6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.88■□□□□ 0.29
Trav6-3Q5R1E6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav6-3Q5R1E6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-3Q5R1E6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-3Q5R1E6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav6-3Q5R1E6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav6-3Q5R1E6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-3Q5R1E6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-3Q5R1E6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-3Q5R1E6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav6-3Q5R1E6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-3Q5R1E6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-3Q5R1E6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-3Q5R1E6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav6-3Q5R1E6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-3Q5R1E6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-3Q5R1E6 Gm11175-201ENSMUST00000116172 543 ntBASIC16.85■□□□□ 0.29
Trav6-3Q5R1E6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-3Q5R1E6 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.85■□□□□ 0.29
Trav6-3Q5R1E6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.85■□□□□ 0.29
Trav6-3Q5R1E6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-3Q5R1E6 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.85■□□□□ 0.29
Trav6-3Q5R1E6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-3Q5R1E6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-3Q5R1E6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-3Q5R1E6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-3Q5R1E6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-3Q5R1E6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav6-3Q5R1E6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-3Q5R1E6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-3Q5R1E6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav6-3Q5R1E6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-3Q5R1E6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav6-3Q5R1E6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-3Q5R1E6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav6-3Q5R1E6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav6-3Q5R1E6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Trav6-3Q5R1E6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav6-3Q5R1E6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-3Q5R1E6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-3Q5R1E6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-3Q5R1E6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-3Q5R1E6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-3Q5R1E6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-3Q5R1E6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-3Q5R1E6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Trav6-3Q5R1E6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-3Q5R1E6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-3Q5R1E6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-3Q5R1E6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-3Q5R1E6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Trav6-3Q5R1E6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-3Q5R1E6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-3Q5R1E6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-3Q5R1E6 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.81■□□□□ 0.28
Trav6-3Q5R1E6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-3Q5R1E6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-3Q5R1E6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-3Q5R1E6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6-3Q5R1E6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms