Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Gm12253Q5NC48 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.17■□□□□ 0.5
Gm12253Q5NC48 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12253Q5NC48 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12253Q5NC48 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.17■□□□□ 0.5
Gm12253Q5NC48 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12253Q5NC48 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12253Q5NC48 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12253Q5NC48 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12253Q5NC48 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12253Q5NC48 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.16■□□□□ 0.5
Gm12253Q5NC48 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Gm12253Q5NC48 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12253Q5NC48 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12253Q5NC48 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.16■□□□□ 0.5
Gm12253Q5NC48 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12253Q5NC48 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12253Q5NC48 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12253Q5NC48 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12253Q5NC48 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12253Q5NC48 Gm10399-202ENSMUST00000202768 748 ntBASIC18.15■□□□□ 0.5
Gm12253Q5NC48 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12253Q5NC48 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.15■□□□□ 0.5
Gm12253Q5NC48 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12253Q5NC48 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12253Q5NC48 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.15■□□□□ 0.5
Gm12253Q5NC48 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12253Q5NC48 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Gm12253Q5NC48 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gm12253Q5NC48 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gm12253Q5NC48 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12253Q5NC48 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12253Q5NC48 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gm12253Q5NC48 Gm22238-201ENSMUST00000175222 88 ntBASIC18.14■□□□□ 0.49
Gm12253Q5NC48 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12253Q5NC48 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12253Q5NC48 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
Gm12253Q5NC48 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm12253Q5NC48 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12253Q5NC48 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm12253Q5NC48 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12253Q5NC48 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.13■□□□□ 0.49
Gm12253Q5NC48 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.13■□□□□ 0.49
Gm12253Q5NC48 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12253Q5NC48 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12253Q5NC48 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12253Q5NC48 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12253Q5NC48 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12253Q5NC48 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.12■□□□□ 0.49
Gm12253Q5NC48 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm12253Q5NC48 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm12253Q5NC48 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm12253Q5NC48 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12253Q5NC48 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Gm12253Q5NC48 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12253Q5NC48 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12253Q5NC48 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12253Q5NC48 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12253Q5NC48 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12253Q5NC48 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm12253Q5NC48 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12253Q5NC48 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12253Q5NC48 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12253Q5NC48 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12253Q5NC48 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm12253Q5NC48 Gm13241-201ENSMUST00000094493 780 ntBASIC18.1■□□□□ 0.49
Gm12253Q5NC48 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm12253Q5NC48 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm12253Q5NC48 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12253Q5NC48 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12253Q5NC48 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12253Q5NC48 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12253Q5NC48 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Gm12253Q5NC48 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12253Q5NC48 Gm9847-201ENSMUST00000052528 599 ntBASIC18.09■□□□□ 0.49
Gm12253Q5NC48 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12253Q5NC48 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12253Q5NC48 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Gm12253Q5NC48 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm12253Q5NC48 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm12253Q5NC48 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12253Q5NC48 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12253Q5NC48 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12253Q5NC48 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12253Q5NC48 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12253Q5NC48 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12253Q5NC48 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm12253Q5NC48 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12253Q5NC48 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12253Q5NC48 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12253Q5NC48 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12253Q5NC48 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12253Q5NC48 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12253Q5NC48 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12253Q5NC48 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.07■□□□□ 0.48
Gm12253Q5NC48 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12253Q5NC48 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm12253Q5NC48 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm12253Q5NC48 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm12253Q5NC48 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms