Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gm12669-201ENSMUST00000122162 1009 ntBASIC38.13■■■■□ 3.7
Pds5bQ4VA53 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC38.13■■■■□ 3.7
Pds5bQ4VA53 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
Pds5bQ4VA53 Gm42642-201ENSMUST00000200683 355 ntBASIC38.12■■■■□ 3.69
Pds5bQ4VA53 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Pds5bQ4VA53 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Pds5bQ4VA53 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC38.11■■■■□ 3.69
Pds5bQ4VA53 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
Pds5bQ4VA53 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
Pds5bQ4VA53 Amer2-203ENSMUST00000225247 2662 ntBASIC38.1■■■■□ 3.69
Pds5bQ4VA53 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
Pds5bQ4VA53 Gm10657-201ENSMUST00000193528 1031 ntBASIC38.09■■■■□ 3.69
Pds5bQ4VA53 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
Pds5bQ4VA53 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
Pds5bQ4VA53 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
Pds5bQ4VA53 Gm26833-201ENSMUST00000180899 440 ntBASIC38.08■■■■□ 3.69
Pds5bQ4VA53 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
Pds5bQ4VA53 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC38.08■■■■□ 3.69
Pds5bQ4VA53 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC38.07■■■■□ 3.69
Pds5bQ4VA53 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
Pds5bQ4VA53 Gm10129-202ENSMUST00000193100 1316 ntBASIC38.07■■■■□ 3.69
Pds5bQ4VA53 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC38.07■■■■□ 3.69
Pds5bQ4VA53 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
Pds5bQ4VA53 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
Pds5bQ4VA53 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC38.05■■■■□ 3.68
Pds5bQ4VA53 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC38.05■■■■□ 3.68
Pds5bQ4VA53 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC38.05■■■■□ 3.68
Pds5bQ4VA53 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
Pds5bQ4VA53 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
Pds5bQ4VA53 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
Pds5bQ4VA53 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC38.04■■■■□ 3.68
Pds5bQ4VA53 Spcs1-204ENSMUST00000226782 949 ntBASIC38.04■■■■□ 3.68
Pds5bQ4VA53 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC38.03■■■■□ 3.68
Pds5bQ4VA53 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Pds5bQ4VA53 Gm43060-201ENSMUST00000200621 289 ntBASIC38.03■■■■□ 3.68
Pds5bQ4VA53 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Pds5bQ4VA53 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
Pds5bQ4VA53 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC38.02■■■■□ 3.68
Pds5bQ4VA53 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC38.02■■■■□ 3.68
Pds5bQ4VA53 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Pds5bQ4VA53 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC38.02■■■■□ 3.68
Pds5bQ4VA53 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC38.01■■■■□ 3.68
Pds5bQ4VA53 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
Pds5bQ4VA53 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC38■■■■□ 3.67
Pds5bQ4VA53 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Pds5bQ4VA53 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Pds5bQ4VA53 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
Pds5bQ4VA53 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC37.98■■■■□ 3.67
Pds5bQ4VA53 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
Pds5bQ4VA53 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Pds5bQ4VA53 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC37.97■■■■□ 3.67
Pds5bQ4VA53 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Pds5bQ4VA53 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Pds5bQ4VA53 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Pds5bQ4VA53 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC37.97■■■■□ 3.67
Pds5bQ4VA53 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC37.97■■■■□ 3.67
Pds5bQ4VA53 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC37.96■■■■□ 3.67
Pds5bQ4VA53 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC37.96■■■■□ 3.67
Pds5bQ4VA53 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC37.96■■■■□ 3.67
Pds5bQ4VA53 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
Pds5bQ4VA53 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
Pds5bQ4VA53 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC37.95■■■■□ 3.67
Pds5bQ4VA53 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC37.95■■■■□ 3.67
Pds5bQ4VA53 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC37.95■■■■□ 3.67
Pds5bQ4VA53 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
Pds5bQ4VA53 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
Pds5bQ4VA53 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC37.94■■■■□ 3.66
Pds5bQ4VA53 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC37.94■■■■□ 3.66
Pds5bQ4VA53 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC37.94■■■■□ 3.66
Pds5bQ4VA53 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
Pds5bQ4VA53 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
Pds5bQ4VA53 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC37.94■■■■□ 3.66
Pds5bQ4VA53 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
Pds5bQ4VA53 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
Pds5bQ4VA53 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
Pds5bQ4VA53 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC37.93■■■■□ 3.66
Pds5bQ4VA53 Gm43759-201ENSMUST00000196925 1261 ntBASIC37.92■■■■□ 3.66
Pds5bQ4VA53 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Pds5bQ4VA53 Gm10033-202ENSMUST00000211874 928 ntBASIC37.92■■■■□ 3.66
Pds5bQ4VA53 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Pds5bQ4VA53 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC37.91■■■■□ 3.66
Pds5bQ4VA53 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
Pds5bQ4VA53 Gm6085-201ENSMUST00000182774 1470 ntBASIC37.91■■■■□ 3.66
Pds5bQ4VA53 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC37.9■■■■□ 3.66
Pds5bQ4VA53 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
Pds5bQ4VA53 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
Pds5bQ4VA53 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
Pds5bQ4VA53 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC37.89■■■■□ 3.66
Pds5bQ4VA53 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC37.88■■■■□ 3.65
Pds5bQ4VA53 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
Pds5bQ4VA53 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
Pds5bQ4VA53 AC122428.3-201ENSMUST00000215551 2290 ntBASIC37.87■■■■□ 3.65
Pds5bQ4VA53 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
Pds5bQ4VA53 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC37.87■■■■□ 3.65
Pds5bQ4VA53 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC37.86■■■■□ 3.65
Pds5bQ4VA53 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
Pds5bQ4VA53 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC37.85■■■■□ 3.65
Pds5bQ4VA53 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Pds5bQ4VA53 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC37.84■■■■□ 3.65
Pds5bQ4VA53 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms