Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim80Q3V061 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim80Q3V061 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.49■■□□□ 1.03
Trim80Q3V061 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
Trim80Q3V061 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.49■■□□□ 1.03
Trim80Q3V061 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim80Q3V061 Gm5812-201ENSMUST00000061073 957 ntBASIC21.49■■□□□ 1.03
Trim80Q3V061 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim80Q3V061 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim80Q3V061 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Trim80Q3V061 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim80Q3V061 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim80Q3V061 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.48■■□□□ 1.03
Trim80Q3V061 Gm5921-201ENSMUST00000075898 882 ntBASIC21.48■■□□□ 1.03
Trim80Q3V061 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim80Q3V061 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Trim80Q3V061 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim80Q3V061 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Trim80Q3V061 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim80Q3V061 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim80Q3V061 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim80Q3V061 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim80Q3V061 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim80Q3V061 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Trim80Q3V061 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim80Q3V061 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim80Q3V061 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim80Q3V061 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim80Q3V061 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim80Q3V061 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.46■■□□□ 1.03
Trim80Q3V061 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Trim80Q3V061 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.46■■□□□ 1.03
Trim80Q3V061 Gm22567-201ENSMUST00000175542 342 ntBASIC21.46■■□□□ 1.03
Trim80Q3V061 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Trim80Q3V061 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim80Q3V061 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim80Q3V061 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim80Q3V061 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Trim80Q3V061 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.45■■□□□ 1.02
Trim80Q3V061 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim80Q3V061 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Trim80Q3V061 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.45■■□□□ 1.02
Trim80Q3V061 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim80Q3V061 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim80Q3V061 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim80Q3V061 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim80Q3V061 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim80Q3V061 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim80Q3V061 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim80Q3V061 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim80Q3V061 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Trim80Q3V061 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim80Q3V061 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Trim80Q3V061 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim80Q3V061 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim80Q3V061 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Trim80Q3V061 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim80Q3V061 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim80Q3V061 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim80Q3V061 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim80Q3V061 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim80Q3V061 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim80Q3V061 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim80Q3V061 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim80Q3V061 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim80Q3V061 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim80Q3V061 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim80Q3V061 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.42■■□□□ 1.02
Trim80Q3V061 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim80Q3V061 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim80Q3V061 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim80Q3V061 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim80Q3V061 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim80Q3V061 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim80Q3V061 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim80Q3V061 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Trim80Q3V061 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim80Q3V061 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim80Q3V061 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trim80Q3V061 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim80Q3V061 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim80Q3V061 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim80Q3V061 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim80Q3V061 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim80Q3V061 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim80Q3V061 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.39■■□□□ 1.02
Trim80Q3V061 Terc-201ENSMUST00000082862 423 ntBASIC21.39■■□□□ 1.01
Trim80Q3V061 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.39■■□□□ 1.01
Trim80Q3V061 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim80Q3V061 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim80Q3V061 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim80Q3V061 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
Trim80Q3V061 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Trim80Q3V061 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim80Q3V061 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim80Q3V061 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim80Q3V061 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim80Q3V061 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim80Q3V061 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim80Q3V061 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms