Protein–RNA interactions for Protein: Q3UW22

Defb48, Beta-defensin 42, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb48Q3UW22 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Defb48Q3UW22 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Defb48Q3UW22 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Defb48Q3UW22 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.68■□□□□ 0.9
Defb48Q3UW22 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.68■□□□□ 0.9
Defb48Q3UW22 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Defb48Q3UW22 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Defb48Q3UW22 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Defb48Q3UW22 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Defb48Q3UW22 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Defb48Q3UW22 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Defb48Q3UW22 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Defb48Q3UW22 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Defb48Q3UW22 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Defb48Q3UW22 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Defb48Q3UW22 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Defb48Q3UW22 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.67■□□□□ 0.9
Defb48Q3UW22 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Defb48Q3UW22 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
Defb48Q3UW22 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.66■□□□□ 0.9
Defb48Q3UW22 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Defb48Q3UW22 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Defb48Q3UW22 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.66■□□□□ 0.9
Defb48Q3UW22 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Defb48Q3UW22 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.66■□□□□ 0.9
Defb48Q3UW22 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Defb48Q3UW22 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Defb48Q3UW22 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Defb48Q3UW22 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Defb48Q3UW22 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.65■□□□□ 0.9
Defb48Q3UW22 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Defb48Q3UW22 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.65■□□□□ 0.9
Defb48Q3UW22 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.65■□□□□ 0.9
Defb48Q3UW22 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Defb48Q3UW22 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Defb48Q3UW22 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Defb48Q3UW22 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Defb48Q3UW22 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Defb48Q3UW22 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Defb48Q3UW22 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Defb48Q3UW22 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Defb48Q3UW22 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.64■□□□□ 0.89
Defb48Q3UW22 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.64■□□□□ 0.89
Defb48Q3UW22 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Defb48Q3UW22 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Defb48Q3UW22 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.63■□□□□ 0.89
Defb48Q3UW22 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Defb48Q3UW22 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.63■□□□□ 0.89
Defb48Q3UW22 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.63■□□□□ 0.89
Defb48Q3UW22 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Defb48Q3UW22 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Defb48Q3UW22 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Defb48Q3UW22 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Defb48Q3UW22 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Defb48Q3UW22 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Defb48Q3UW22 Gm22238-201ENSMUST00000175222 88 ntBASIC20.62■□□□□ 0.89
Defb48Q3UW22 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Defb48Q3UW22 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.62■□□□□ 0.89
Defb48Q3UW22 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Defb48Q3UW22 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Defb48Q3UW22 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Defb48Q3UW22 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Defb48Q3UW22 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Defb48Q3UW22 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Defb48Q3UW22 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Defb48Q3UW22 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Defb48Q3UW22 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Defb48Q3UW22 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Defb48Q3UW22 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Defb48Q3UW22 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Defb48Q3UW22 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.6■□□□□ 0.89
Defb48Q3UW22 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.6■□□□□ 0.89
Defb48Q3UW22 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.6■□□□□ 0.89
Defb48Q3UW22 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Defb48Q3UW22 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Defb48Q3UW22 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Defb48Q3UW22 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Defb48Q3UW22 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Defb48Q3UW22 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Defb48Q3UW22 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Defb48Q3UW22 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Defb48Q3UW22 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.59■□□□□ 0.89
Defb48Q3UW22 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Defb48Q3UW22 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Defb48Q3UW22 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Defb48Q3UW22 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Defb48Q3UW22 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Defb48Q3UW22 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Defb48Q3UW22 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Defb48Q3UW22 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Defb48Q3UW22 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Defb48Q3UW22 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Defb48Q3UW22 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Defb48Q3UW22 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.57■□□□□ 0.88
Defb48Q3UW22 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.57■□□□□ 0.88
Defb48Q3UW22 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Defb48Q3UW22 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Defb48Q3UW22 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Defb48Q3UW22 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Defb48Q3UW22 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms