Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf223Q3UV31 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf223Q3UV31 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rnf223Q3UV31 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf223Q3UV31 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf223Q3UV31 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf223Q3UV31 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.56■□□□□ 0.88
Rnf223Q3UV31 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf223Q3UV31 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rnf223Q3UV31 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rnf223Q3UV31 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf223Q3UV31 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf223Q3UV31 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Rnf223Q3UV31 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rnf223Q3UV31 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.54■□□□□ 0.88
Rnf223Q3UV31 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf223Q3UV31 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf223Q3UV31 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf223Q3UV31 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf223Q3UV31 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.54■□□□□ 0.88
Rnf223Q3UV31 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.54■□□□□ 0.88
Rnf223Q3UV31 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rnf223Q3UV31 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf223Q3UV31 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf223Q3UV31 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.53■□□□□ 0.88
Rnf223Q3UV31 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rnf223Q3UV31 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf223Q3UV31 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf223Q3UV31 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf223Q3UV31 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf223Q3UV31 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf223Q3UV31 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf223Q3UV31 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf223Q3UV31 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf223Q3UV31 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf223Q3UV31 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rnf223Q3UV31 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
Rnf223Q3UV31 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf223Q3UV31 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf223Q3UV31 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf223Q3UV31 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf223Q3UV31 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf223Q3UV31 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf223Q3UV31 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf223Q3UV31 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf223Q3UV31 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf223Q3UV31 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.51■□□□□ 0.87
Rnf223Q3UV31 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.51■□□□□ 0.87
Rnf223Q3UV31 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf223Q3UV31 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rnf223Q3UV31 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf223Q3UV31 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf223Q3UV31 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf223Q3UV31 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Rnf223Q3UV31 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.49■□□□□ 0.87
Rnf223Q3UV31 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf223Q3UV31 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf223Q3UV31 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rnf223Q3UV31 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf223Q3UV31 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Rnf223Q3UV31 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf223Q3UV31 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf223Q3UV31 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.47■□□□□ 0.87
Rnf223Q3UV31 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf223Q3UV31 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.47■□□□□ 0.87
Rnf223Q3UV31 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf223Q3UV31 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf223Q3UV31 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf223Q3UV31 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rnf223Q3UV31 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf223Q3UV31 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.46■□□□□ 0.87
Rnf223Q3UV31 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf223Q3UV31 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf223Q3UV31 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.46■□□□□ 0.87
Rnf223Q3UV31 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf223Q3UV31 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf223Q3UV31 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf223Q3UV31 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf223Q3UV31 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf223Q3UV31 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf223Q3UV31 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf223Q3UV31 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf223Q3UV31 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf223Q3UV31 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf223Q3UV31 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.45■□□□□ 0.86
Rnf223Q3UV31 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rnf223Q3UV31 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf223Q3UV31 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf223Q3UV31 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf223Q3UV31 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf223Q3UV31 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf223Q3UV31 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf223Q3UV31 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf223Q3UV31 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf223Q3UV31 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf223Q3UV31 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rnf223Q3UV31 Gm9847-201ENSMUST00000052528 599 ntBASIC20.43■□□□□ 0.86
Rnf223Q3UV31 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf223Q3UV31 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf223Q3UV31 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms