Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm43566-201ENSMUST00000196851 808 ntBASIC24.44■■□□□ 1.5
Cdkl5Q3UTQ8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Cdkl5Q3UTQ8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cdkl5Q3UTQ8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cdkl5Q3UTQ8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cdkl5Q3UTQ8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cdkl5Q3UTQ8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdkl5Q3UTQ8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdkl5Q3UTQ8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Cdkl5Q3UTQ8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Cdkl5Q3UTQ8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.43■■□□□ 1.5
Cdkl5Q3UTQ8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdkl5Q3UTQ8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.43■■□□□ 1.5
Cdkl5Q3UTQ8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdkl5Q3UTQ8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC24.43■■□□□ 1.5
Cdkl5Q3UTQ8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Cdkl5Q3UTQ8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cdkl5Q3UTQ8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cdkl5Q3UTQ8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cdkl5Q3UTQ8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
Cdkl5Q3UTQ8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cdkl5Q3UTQ8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cdkl5Q3UTQ8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cdkl5Q3UTQ8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cdkl5Q3UTQ8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cdkl5Q3UTQ8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cdkl5Q3UTQ8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Cdkl5Q3UTQ8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.41■■□□□ 1.5
Cdkl5Q3UTQ8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cdkl5Q3UTQ8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cdkl5Q3UTQ8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cdkl5Q3UTQ8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Cdkl5Q3UTQ8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cdkl5Q3UTQ8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Cdkl5Q3UTQ8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC24.4■■□□□ 1.5
Cdkl5Q3UTQ8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Cdkl5Q3UTQ8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cdkl5Q3UTQ8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.4■■□□□ 1.5
Cdkl5Q3UTQ8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
Cdkl5Q3UTQ8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Cdkl5Q3UTQ8 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.39■■□□□ 1.5
Cdkl5Q3UTQ8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cdkl5Q3UTQ8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cdkl5Q3UTQ8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cdkl5Q3UTQ8 Gm13238-201ENSMUST00000117655 780 ntBASIC24.38■■□□□ 1.49
Cdkl5Q3UTQ8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cdkl5Q3UTQ8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Cdkl5Q3UTQ8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cdkl5Q3UTQ8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cdkl5Q3UTQ8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Cdkl5Q3UTQ8 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.37■■□□□ 1.49
Cdkl5Q3UTQ8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.37■■□□□ 1.49
Cdkl5Q3UTQ8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
Cdkl5Q3UTQ8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cdkl5Q3UTQ8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cdkl5Q3UTQ8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cdkl5Q3UTQ8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cdkl5Q3UTQ8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.36■■□□□ 1.49
Cdkl5Q3UTQ8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cdkl5Q3UTQ8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.36■■□□□ 1.49
Cdkl5Q3UTQ8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.36■■□□□ 1.49
Cdkl5Q3UTQ8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Cdkl5Q3UTQ8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cdkl5Q3UTQ8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cdkl5Q3UTQ8 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.35■■□□□ 1.49
Cdkl5Q3UTQ8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cdkl5Q3UTQ8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Cdkl5Q3UTQ8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cdkl5Q3UTQ8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cdkl5Q3UTQ8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Cdkl5Q3UTQ8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Cdkl5Q3UTQ8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cdkl5Q3UTQ8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cdkl5Q3UTQ8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cdkl5Q3UTQ8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cdkl5Q3UTQ8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cdkl5Q3UTQ8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.33■■□□□ 1.49
Cdkl5Q3UTQ8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cdkl5Q3UTQ8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Cdkl5Q3UTQ8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cdkl5Q3UTQ8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
Cdkl5Q3UTQ8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cdkl5Q3UTQ8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cdkl5Q3UTQ8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cdkl5Q3UTQ8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cdkl5Q3UTQ8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Cdkl5Q3UTQ8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC24.31■■□□□ 1.48
Cdkl5Q3UTQ8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Cdkl5Q3UTQ8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Cdkl5Q3UTQ8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdkl5Q3UTQ8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdkl5Q3UTQ8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdkl5Q3UTQ8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.3■■□□□ 1.48
Cdkl5Q3UTQ8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cdkl5Q3UTQ8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdkl5Q3UTQ8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.29■■□□□ 1.48
Cdkl5Q3UTQ8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cdkl5Q3UTQ8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
Cdkl5Q3UTQ8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cdkl5Q3UTQ8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms