Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Lsmem1Q3UQS2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lsmem1Q3UQS2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Lsmem1Q3UQS2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lsmem1Q3UQS2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lsmem1Q3UQS2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Lsmem1Q3UQS2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsmem1Q3UQS2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsmem1Q3UQS2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lsmem1Q3UQS2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsmem1Q3UQS2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsmem1Q3UQS2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsmem1Q3UQS2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsmem1Q3UQS2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lsmem1Q3UQS2 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.45■■□□□ 1.02
Lsmem1Q3UQS2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.45■■□□□ 1.02
Lsmem1Q3UQS2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.45■■□□□ 1.02
Lsmem1Q3UQS2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.45■■□□□ 1.02
Lsmem1Q3UQS2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsmem1Q3UQS2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsmem1Q3UQS2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Lsmem1Q3UQS2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsmem1Q3UQS2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.44■■□□□ 1.02
Lsmem1Q3UQS2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.44■■□□□ 1.02
Lsmem1Q3UQS2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Lsmem1Q3UQS2 Gm10399-202ENSMUST00000202768 748 ntBASIC21.43■■□□□ 1.02
Lsmem1Q3UQS2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.43■■□□□ 1.02
Lsmem1Q3UQS2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsmem1Q3UQS2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsmem1Q3UQS2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lsmem1Q3UQS2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsmem1Q3UQS2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsmem1Q3UQS2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsmem1Q3UQS2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsmem1Q3UQS2 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.42■■□□□ 1.02
Lsmem1Q3UQS2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsmem1Q3UQS2 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.4■■□□□ 1.02
Lsmem1Q3UQS2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsmem1Q3UQS2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsmem1Q3UQS2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsmem1Q3UQS2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lsmem1Q3UQS2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Lsmem1Q3UQS2 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.4■■□□□ 1.02
Lsmem1Q3UQS2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsmem1Q3UQS2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsmem1Q3UQS2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsmem1Q3UQS2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lsmem1Q3UQS2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lsmem1Q3UQS2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.39■■□□□ 1.01
Lsmem1Q3UQS2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsmem1Q3UQS2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsmem1Q3UQS2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsmem1Q3UQS2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lsmem1Q3UQS2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lsmem1Q3UQS2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.38■■□□□ 1.01
Lsmem1Q3UQS2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Lsmem1Q3UQS2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Lsmem1Q3UQS2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Lsmem1Q3UQS2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lsmem1Q3UQS2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Lsmem1Q3UQS2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lsmem1Q3UQS2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lsmem1Q3UQS2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lsmem1Q3UQS2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Lsmem1Q3UQS2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lsmem1Q3UQS2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.37■■□□□ 1.01
Lsmem1Q3UQS2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lsmem1Q3UQS2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lsmem1Q3UQS2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lsmem1Q3UQS2 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.36■■□□□ 1.01
Lsmem1Q3UQS2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lsmem1Q3UQS2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsmem1Q3UQS2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsmem1Q3UQS2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Lsmem1Q3UQS2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsmem1Q3UQS2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.35■■□□□ 1.01
Lsmem1Q3UQS2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.35■■□□□ 1.01
Lsmem1Q3UQS2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.35■■□□□ 1.01
Lsmem1Q3UQS2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lsmem1Q3UQS2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsmem1Q3UQS2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsmem1Q3UQS2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Lsmem1Q3UQS2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lsmem1Q3UQS2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Lsmem1Q3UQS2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lsmem1Q3UQS2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lsmem1Q3UQS2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.34■■□□□ 1.01
Lsmem1Q3UQS2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lsmem1Q3UQS2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms