Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Spg11Q3UHA3 Gm10602-201ENSMUST00000098239 609 ntBASIC20.05■□□□□ 0.8
Spg11Q3UHA3 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.05■□□□□ 0.8
Spg11Q3UHA3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Spg11Q3UHA3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Spg11Q3UHA3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Spg11Q3UHA3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Spg11Q3UHA3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Spg11Q3UHA3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Spg11Q3UHA3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.04■□□□□ 0.8
Spg11Q3UHA3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Spg11Q3UHA3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Spg11Q3UHA3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Spg11Q3UHA3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.03■□□□□ 0.8
Spg11Q3UHA3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Spg11Q3UHA3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.03■□□□□ 0.8
Spg11Q3UHA3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Spg11Q3UHA3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.03■□□□□ 0.8
Spg11Q3UHA3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Spg11Q3UHA3 Zxda-201ENSMUST00000117281 2621 ntBASIC20.02■□□□□ 0.8
Spg11Q3UHA3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.02■□□□□ 0.79
Spg11Q3UHA3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Spg11Q3UHA3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Spg11Q3UHA3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Spg11Q3UHA3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Spg11Q3UHA3 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.01■□□□□ 0.79
Spg11Q3UHA3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Spg11Q3UHA3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.01■□□□□ 0.79
Spg11Q3UHA3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.01■□□□□ 0.79
Spg11Q3UHA3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Spg11Q3UHA3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Spg11Q3UHA3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Spg11Q3UHA3 Gm18671-201ENSMUST00000214826 683 ntBASIC20.01■□□□□ 0.79
Spg11Q3UHA3 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.01■□□□□ 0.79
Spg11Q3UHA3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20■□□□□ 0.79
Spg11Q3UHA3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Spg11Q3UHA3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Spg11Q3UHA3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20■□□□□ 0.79
Spg11Q3UHA3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Spg11Q3UHA3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Spg11Q3UHA3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Spg11Q3UHA3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20■□□□□ 0.79
Spg11Q3UHA3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20■□□□□ 0.79
Spg11Q3UHA3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Spg11Q3UHA3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20■□□□□ 0.79
Spg11Q3UHA3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Spg11Q3UHA3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.99■□□□□ 0.79
Spg11Q3UHA3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Spg11Q3UHA3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.99■□□□□ 0.79
Spg11Q3UHA3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Spg11Q3UHA3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.98■□□□□ 0.79
Spg11Q3UHA3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.98■□□□□ 0.79
Spg11Q3UHA3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Spg11Q3UHA3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Spg11Q3UHA3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Spg11Q3UHA3 Gm10653-202ENSMUST00000139570 835 ntBASIC19.98■□□□□ 0.79
Spg11Q3UHA3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Spg11Q3UHA3 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.97■□□□□ 0.79
Spg11Q3UHA3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Spg11Q3UHA3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Spg11Q3UHA3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Spg11Q3UHA3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Spg11Q3UHA3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Spg11Q3UHA3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Spg11Q3UHA3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Spg11Q3UHA3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.96■□□□□ 0.79
Spg11Q3UHA3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Spg11Q3UHA3 Gm40848-201ENSMUST00000221998 324 ntBASIC19.96■□□□□ 0.79
Spg11Q3UHA3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Spg11Q3UHA3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Spg11Q3UHA3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.95■□□□□ 0.78
Spg11Q3UHA3 Gm22240-201ENSMUST00000175225 82 ntBASIC19.95■□□□□ 0.78
Spg11Q3UHA3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.95■□□□□ 0.78
Spg11Q3UHA3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Spg11Q3UHA3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.94■□□□□ 0.78
Spg11Q3UHA3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Spg11Q3UHA3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Spg11Q3UHA3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.94■□□□□ 0.78
Spg11Q3UHA3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Spg11Q3UHA3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
Spg11Q3UHA3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Spg11Q3UHA3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.93■□□□□ 0.78
Spg11Q3UHA3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.93■□□□□ 0.78
Spg11Q3UHA3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Spg11Q3UHA3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Spg11Q3UHA3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.92■□□□□ 0.78
Spg11Q3UHA3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Spg11Q3UHA3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Spg11Q3UHA3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Spg11Q3UHA3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Spg11Q3UHA3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Spg11Q3UHA3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Spg11Q3UHA3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Spg11Q3UHA3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.9■□□□□ 0.78
Spg11Q3UHA3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.9■□□□□ 0.78
Spg11Q3UHA3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Spg11Q3UHA3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Spg11Q3UHA3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Spg11Q3UHA3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
Spg11Q3UHA3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms