Protein–RNA interactions for Protein: Q3UGP9

Lrrc58, Leucine-rich repeat-containing protein 58, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc58Q3UGP9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.56■□□□□ 0.88
Lrrc58Q3UGP9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lrrc58Q3UGP9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrc58Q3UGP9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.54■□□□□ 0.88
Lrrc58Q3UGP9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lrrc58Q3UGP9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrc58Q3UGP9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.54■□□□□ 0.88
Lrrc58Q3UGP9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Lrrc58Q3UGP9 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.54■□□□□ 0.88
Lrrc58Q3UGP9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrc58Q3UGP9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrc58Q3UGP9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc58Q3UGP9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.53■□□□□ 0.88
Lrrc58Q3UGP9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc58Q3UGP9 Gm15820-201ENSMUST00000201566 728 ntBASIC20.53■□□□□ 0.88
Lrrc58Q3UGP9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc58Q3UGP9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.53■□□□□ 0.88
Lrrc58Q3UGP9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc58Q3UGP9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lrrc58Q3UGP9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.53■□□□□ 0.88
Lrrc58Q3UGP9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lrrc58Q3UGP9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lrrc58Q3UGP9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Lrrc58Q3UGP9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lrrc58Q3UGP9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc58Q3UGP9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc58Q3UGP9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Lrrc58Q3UGP9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc58Q3UGP9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc58Q3UGP9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.51■□□□□ 0.87
Lrrc58Q3UGP9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Lrrc58Q3UGP9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Lrrc58Q3UGP9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrc58Q3UGP9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Lrrc58Q3UGP9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrc58Q3UGP9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrc58Q3UGP9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.5■□□□□ 0.87
Lrrc58Q3UGP9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrc58Q3UGP9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Lrrc58Q3UGP9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc58Q3UGP9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc58Q3UGP9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc58Q3UGP9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc58Q3UGP9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrc58Q3UGP9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Lrrc58Q3UGP9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.48■□□□□ 0.87
Lrrc58Q3UGP9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrc58Q3UGP9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrc58Q3UGP9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrc58Q3UGP9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Lrrc58Q3UGP9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrc58Q3UGP9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrc58Q3UGP9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Lrrc58Q3UGP9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrc58Q3UGP9 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.47■□□□□ 0.87
Lrrc58Q3UGP9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.47■□□□□ 0.87
Lrrc58Q3UGP9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrc58Q3UGP9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Lrrc58Q3UGP9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc58Q3UGP9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc58Q3UGP9 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.45■□□□□ 0.86
Lrrc58Q3UGP9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc58Q3UGP9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc58Q3UGP9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc58Q3UGP9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrc58Q3UGP9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrc58Q3UGP9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms