Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lrrc28Q3TX51 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lrrc28Q3TX51 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lrrc28Q3TX51 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lrrc28Q3TX51 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.97■□□□□ 0.79
Lrrc28Q3TX51 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lrrc28Q3TX51 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.97■□□□□ 0.79
Lrrc28Q3TX51 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lrrc28Q3TX51 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Lrrc28Q3TX51 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lrrc28Q3TX51 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lrrc28Q3TX51 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lrrc28Q3TX51 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lrrc28Q3TX51 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.96■□□□□ 0.79
Lrrc28Q3TX51 Gm9847-201ENSMUST00000052528 599 ntBASIC19.96■□□□□ 0.79
Lrrc28Q3TX51 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lrrc28Q3TX51 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lrrc28Q3TX51 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Lrrc28Q3TX51 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.96■□□□□ 0.79
Lrrc28Q3TX51 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Gm13241-201ENSMUST00000094493 780 ntBASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.95■□□□□ 0.78
Lrrc28Q3TX51 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrc28Q3TX51 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrc28Q3TX51 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrc28Q3TX51 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.94■□□□□ 0.78
Lrrc28Q3TX51 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lrrc28Q3TX51 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lrrc28Q3TX51 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrc28Q3TX51 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrc28Q3TX51 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrc28Q3TX51 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrc28Q3TX51 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrc28Q3TX51 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lrrc28Q3TX51 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.92■□□□□ 0.78
Lrrc28Q3TX51 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 Gm12922-201ENSMUST00000120626 809 ntBASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lrrc28Q3TX51 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrc28Q3TX51 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrc28Q3TX51 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.9■□□□□ 0.78
Lrrc28Q3TX51 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrc28Q3TX51 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrc28Q3TX51 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrc28Q3TX51 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.9■□□□□ 0.78
Lrrc28Q3TX51 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrc28Q3TX51 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lrrc28Q3TX51 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc28Q3TX51 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.89■□□□□ 0.77
Lrrc28Q3TX51 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc28Q3TX51 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc28Q3TX51 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc28Q3TX51 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc28Q3TX51 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.89■□□□□ 0.77
Lrrc28Q3TX51 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc28Q3TX51 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc28Q3TX51 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lrrc28Q3TX51 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc28Q3TX51 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc28Q3TX51 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc28Q3TX51 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Lrrc28Q3TX51 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Lrrc28Q3TX51 Gm21956-201ENSMUST00000179946 522 ntBASIC19.88■□□□□ 0.77
Lrrc28Q3TX51 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lrrc28Q3TX51 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Lrrc28Q3TX51 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Lrrc28Q3TX51 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
Lrrc28Q3TX51 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms