Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pkd1l3Q2EG98 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.94■□□□□ 0.62
Pkd1l3Q2EG98 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pkd1l3Q2EG98 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pkd1l3Q2EG98 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pkd1l3Q2EG98 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pkd1l3Q2EG98 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pkd1l3Q2EG98 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pkd1l3Q2EG98 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pkd1l3Q2EG98 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.93■□□□□ 0.62
Pkd1l3Q2EG98 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pkd1l3Q2EG98 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.92■□□□□ 0.62
Pkd1l3Q2EG98 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pkd1l3Q2EG98 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.91■□□□□ 0.62
Pkd1l3Q2EG98 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pkd1l3Q2EG98 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.91■□□□□ 0.62
Pkd1l3Q2EG98 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pkd1l3Q2EG98 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pkd1l3Q2EG98 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.9■□□□□ 0.62
Pkd1l3Q2EG98 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.9■□□□□ 0.62
Pkd1l3Q2EG98 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l3Q2EG98 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l3Q2EG98 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l3Q2EG98 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pkd1l3Q2EG98 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.9■□□□□ 0.62
Pkd1l3Q2EG98 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l3Q2EG98 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l3Q2EG98 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l3Q2EG98 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pkd1l3Q2EG98 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.89■□□□□ 0.61
Pkd1l3Q2EG98 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.89■□□□□ 0.61
Pkd1l3Q2EG98 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Pkd1l3Q2EG98 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Pkd1l3Q2EG98 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pkd1l3Q2EG98 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.89■□□□□ 0.61
Pkd1l3Q2EG98 Golgb1-201ENSMUST00000023534 498 ntBASIC18.89■□□□□ 0.61
Pkd1l3Q2EG98 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pkd1l3Q2EG98 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pkd1l3Q2EG98 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pkd1l3Q2EG98 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pkd1l3Q2EG98 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pkd1l3Q2EG98 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pkd1l3Q2EG98 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.88■□□□□ 0.61
Pkd1l3Q2EG98 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pkd1l3Q2EG98 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Pkd1l3Q2EG98 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pkd1l3Q2EG98 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Pkd1l3Q2EG98 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.87■□□□□ 0.61
Pkd1l3Q2EG98 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Pkd1l3Q2EG98 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pkd1l3Q2EG98 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pkd1l3Q2EG98 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pkd1l3Q2EG98 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pkd1l3Q2EG98 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pkd1l3Q2EG98 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.87■□□□□ 0.61
Pkd1l3Q2EG98 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pkd1l3Q2EG98 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pkd1l3Q2EG98 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pkd1l3Q2EG98 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pkd1l3Q2EG98 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pkd1l3Q2EG98 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.86■□□□□ 0.61
Pkd1l3Q2EG98 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pkd1l3Q2EG98 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkd1l3Q2EG98 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkd1l3Q2EG98 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pkd1l3Q2EG98 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkd1l3Q2EG98 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pkd1l3Q2EG98 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pkd1l3Q2EG98 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Pkd1l3Q2EG98 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pkd1l3Q2EG98 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.84■□□□□ 0.61
Pkd1l3Q2EG98 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Pkd1l3Q2EG98 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkd1l3Q2EG98 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkd1l3Q2EG98 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pkd1l3Q2EG98 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pkd1l3Q2EG98 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pkd1l3Q2EG98 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pkd1l3Q2EG98 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pkd1l3Q2EG98 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.83■□□□□ 0.6
Pkd1l3Q2EG98 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pkd1l3Q2EG98 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pkd1l3Q2EG98 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.82■□□□□ 0.6
Pkd1l3Q2EG98 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.82■□□□□ 0.6
Pkd1l3Q2EG98 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkd1l3Q2EG98 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.82■□□□□ 0.6
Pkd1l3Q2EG98 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pkd1l3Q2EG98 Gm27454-201ENSMUST00000185090 204 ntBASIC18.82■□□□□ 0.6
Pkd1l3Q2EG98 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms