Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd8Q09XV5 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.53■□□□□ 0.72
Chd8Q09XV5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd8Q09XV5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd8Q09XV5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chd8Q09XV5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.53■□□□□ 0.72
Chd8Q09XV5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd8Q09XV5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.52■□□□□ 0.72
Chd8Q09XV5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.52■□□□□ 0.72
Chd8Q09XV5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chd8Q09XV5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd8Q09XV5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd8Q09XV5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd8Q09XV5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd8Q09XV5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd8Q09XV5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Chd8Q09XV5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd8Q09XV5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd8Q09XV5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Chd8Q09XV5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.51■□□□□ 0.71
Chd8Q09XV5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd8Q09XV5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd8Q09XV5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd8Q09XV5 Gm13836-201ENSMUST00000121159 501 ntBASIC19.5■□□□□ 0.71
Chd8Q09XV5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd8Q09XV5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd8Q09XV5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd8Q09XV5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.49■□□□□ 0.71
Chd8Q09XV5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd8Q09XV5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd8Q09XV5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.49■□□□□ 0.71
Chd8Q09XV5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
Chd8Q09XV5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Chd8Q09XV5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chd8Q09XV5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd8Q09XV5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.48■□□□□ 0.71
Chd8Q09XV5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd8Q09XV5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Chd8Q09XV5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.48■□□□□ 0.71
Chd8Q09XV5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd8Q09XV5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd8Q09XV5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.48■□□□□ 0.71
Chd8Q09XV5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Chd8Q09XV5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd8Q09XV5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd8Q09XV5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Chd8Q09XV5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Chd8Q09XV5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd8Q09XV5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.47■□□□□ 0.71
Chd8Q09XV5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd8Q09XV5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.46■□□□□ 0.71
Chd8Q09XV5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.46■□□□□ 0.71
Chd8Q09XV5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Chd8Q09XV5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chd8Q09XV5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Chd8Q09XV5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd8Q09XV5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd8Q09XV5 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.44■□□□□ 0.7
Chd8Q09XV5 Gm12441-201ENSMUST00000121806 588 ntBASIC19.44■□□□□ 0.7
Chd8Q09XV5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Chd8Q09XV5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd8Q09XV5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd8Q09XV5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.44■□□□□ 0.7
Chd8Q09XV5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd8Q09XV5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chd8Q09XV5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.43■□□□□ 0.7
Chd8Q09XV5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.43■□□□□ 0.7
Chd8Q09XV5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.42■□□□□ 0.7
Chd8Q09XV5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd8Q09XV5 Gm42778-201ENSMUST00000199644 553 ntBASIC19.42■□□□□ 0.7
Chd8Q09XV5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd8Q09XV5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chd8Q09XV5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd8Q09XV5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.41■□□□□ 0.7
Chd8Q09XV5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Chd8Q09XV5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd8Q09XV5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd8Q09XV5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd8Q09XV5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.4■□□□□ 0.7
Chd8Q09XV5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd8Q09XV5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd8Q09XV5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd8Q09XV5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.4■□□□□ 0.7
Chd8Q09XV5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd8Q09XV5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd8Q09XV5 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.39■□□□□ 0.7
Chd8Q09XV5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.39■□□□□ 0.7
Chd8Q09XV5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd8Q09XV5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Chd8Q09XV5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.39■□□□□ 0.69
Chd8Q09XV5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.39■□□□□ 0.69
Chd8Q09XV5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd8Q09XV5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd8Q09XV5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Chd8Q09XV5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Chd8Q09XV5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd8Q09XV5 Gm40848-201ENSMUST00000221998 324 ntBASIC19.38■□□□□ 0.69
Chd8Q09XV5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chd8Q09XV5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd8Q09XV5 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms