Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Crnkl1P63154 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.64■□□□□ 0.9
Crnkl1P63154 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Crnkl1P63154 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crnkl1P63154 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crnkl1P63154 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Crnkl1P63154 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Crnkl1P63154 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crnkl1P63154 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crnkl1P63154 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crnkl1P63154 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Crnkl1P63154 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Crnkl1P63154 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Crnkl1P63154 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Crnkl1P63154 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Crnkl1P63154 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Crnkl1P63154 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Crnkl1P63154 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crnkl1P63154 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Crnkl1P63154 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crnkl1P63154 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Crnkl1P63154 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crnkl1P63154 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Crnkl1P63154 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crnkl1P63154 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crnkl1P63154 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Crnkl1P63154 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crnkl1P63154 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Crnkl1P63154 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Crnkl1P63154 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Crnkl1P63154 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
Crnkl1P63154 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Crnkl1P63154 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Crnkl1P63154 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.61■□□□□ 0.89
Crnkl1P63154 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crnkl1P63154 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crnkl1P63154 Gm9812-201ENSMUST00000061934 968 ntBASIC20.6■□□□□ 0.89
Crnkl1P63154 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Crnkl1P63154 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.6■□□□□ 0.89
Crnkl1P63154 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Crnkl1P63154 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Crnkl1P63154 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Crnkl1P63154 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Crnkl1P63154 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crnkl1P63154 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crnkl1P63154 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crnkl1P63154 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crnkl1P63154 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crnkl1P63154 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Crnkl1P63154 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Crnkl1P63154 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Crnkl1P63154 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Crnkl1P63154 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Crnkl1P63154 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Crnkl1P63154 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Crnkl1P63154 Scarna2-201ENSMUST00000157560 414 ntBASIC20.57■□□□□ 0.88
Crnkl1P63154 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Crnkl1P63154 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Crnkl1P63154 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Crnkl1P63154 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Crnkl1P63154 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Crnkl1P63154 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Crnkl1P63154 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Crnkl1P63154 Golph3-202ENSMUST00000226517 2359 ntBASIC20.57■□□□□ 0.88
Crnkl1P63154 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Crnkl1P63154 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Crnkl1P63154 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Crnkl1P63154 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.56■□□□□ 0.88
Crnkl1P63154 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.56■□□□□ 0.88
Crnkl1P63154 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Crnkl1P63154 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.56■□□□□ 0.88
Crnkl1P63154 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Crnkl1P63154 Gm9806-201ENSMUST00000051080 552 ntBASIC20.56■□□□□ 0.88
Crnkl1P63154 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Crnkl1P63154 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Crnkl1P63154 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Crnkl1P63154 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Crnkl1P63154 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.56■□□□□ 0.88
Crnkl1P63154 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Crnkl1P63154 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Crnkl1P63154 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Crnkl1P63154 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.55■□□□□ 0.88
Crnkl1P63154 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Crnkl1P63154 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Crnkl1P63154 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Crnkl1P63154 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Crnkl1P63154 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Crnkl1P63154 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Crnkl1P63154 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Crnkl1P63154 Gm11687-201ENSMUST00000118911 886 ntBASIC20.54■□□□□ 0.88
Crnkl1P63154 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Crnkl1P63154 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.54■□□□□ 0.88
Crnkl1P63154 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.54■□□□□ 0.88
Crnkl1P63154 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Crnkl1P63154 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Crnkl1P63154 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Crnkl1P63154 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Crnkl1P63154 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Crnkl1P63154 Gm11175-201ENSMUST00000116172 543 ntBASIC20.53■□□□□ 0.88
Crnkl1P63154 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms