Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rps28P62858 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rps28P62858 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rps28P62858 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rps28P62858 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rps28P62858 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rps28P62858 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rps28P62858 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rps28P62858 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.62□□□□□ -0.39
Rps28P62858 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rps28P62858 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rps28P62858 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rps28P62858 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rps28P62858 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rps28P62858 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rps28P62858 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rps28P62858 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Rps28P62858 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rps28P62858 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rps28P62858 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rps28P62858 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rps28P62858 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC12.61□□□□□ -0.39
Rps28P62858 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rps28P62858 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rps28P62858 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rps28P62858 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rps28P62858 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rps28P62858 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rps28P62858 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Rps28P62858 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rps28P62858 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rps28P62858 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Rps28P62858 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.6□□□□□ -0.39
Rps28P62858 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC12.6□□□□□ -0.39
Rps28P62858 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Rps28P62858 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rps28P62858 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rps28P62858 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rps28P62858 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Rps28P62858 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC12.6□□□□□ -0.39
Rps28P62858 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rps28P62858 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rps28P62858 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rps28P62858 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rps28P62858 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC12.59□□□□□ -0.39
Rps28P62858 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rps28P62858 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC12.59□□□□□ -0.39
Rps28P62858 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rps28P62858 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rps28P62858 AC153962.1-201ENSMUST00000218530 1948 ntBASIC12.59□□□□□ -0.39
Rps28P62858 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Rps28P62858 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rps28P62858 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rps28P62858 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rps28P62858 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rps28P62858 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Rps28P62858 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rps28P62858 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rps28P62858 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rps28P62858 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rps28P62858 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.58□□□□□ -0.4
Rps28P62858 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rps28P62858 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rps28P62858 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.58□□□□□ -0.4
Rps28P62858 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rps28P62858 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rps28P62858 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rps28P62858 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rps28P62858 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rps28P62858 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rps28P62858 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC12.57□□□□□ -0.4
Rps28P62858 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rps28P62858 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Rps28P62858 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Rps28P62858 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rps28P62858 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rps28P62858 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rps28P62858 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rps28P62858 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Rps28P62858 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rps28P62858 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rps28P62858 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rps28P62858 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rps28P62858 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rps28P62858 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rps28P62858 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rps28P62858 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rps28P62858 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rps28P62858 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rps28P62858 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rps28P62858 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rps28P62858 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.55□□□□□ -0.4
Rps28P62858 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rps28P62858 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rps28P62858 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rps28P62858 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rps28P62858 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rps28P62858 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rps28P62858 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rps28P62858 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms