Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm6P62313 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm6P62313 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm6P62313 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm6P62313 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lsm6P62313 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.45■□□□□ 0.54
Lsm6P62313 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.45■□□□□ 0.54
Lsm6P62313 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Lsm6P62313 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Lsm6P62313 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm6P62313 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm6P62313 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.45■□□□□ 0.54
Lsm6P62313 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.45■□□□□ 0.54
Lsm6P62313 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm6P62313 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lsm6P62313 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Lsm6P62313 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Lsm6P62313 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Lsm6P62313 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Lsm6P62313 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm6P62313 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Lsm6P62313 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm6P62313 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm6P62313 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm6P62313 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm6P62313 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Lsm6P62313 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.44■□□□□ 0.54
Lsm6P62313 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm6P62313 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm6P62313 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm6P62313 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm6P62313 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm6P62313 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lsm6P62313 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm6P62313 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.43■□□□□ 0.54
Lsm6P62313 Gm5921-201ENSMUST00000075898 882 ntBASIC18.43■□□□□ 0.54
Lsm6P62313 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lsm6P62313 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lsm6P62313 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.43■□□□□ 0.54
Lsm6P62313 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.43■□□□□ 0.54
Lsm6P62313 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm6P62313 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm6P62313 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm6P62313 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm6P62313 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Lsm6P62313 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm6P62313 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm6P62313 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.42■□□□□ 0.54
Lsm6P62313 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm6P62313 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm6P62313 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm6P62313 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lsm6P62313 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.41■□□□□ 0.54
Lsm6P62313 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Lsm6P62313 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm6P62313 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Lsm6P62313 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm6P62313 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.41■□□□□ 0.54
Lsm6P62313 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm6P62313 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lsm6P62313 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Lsm6P62313 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm6P62313 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm6P62313 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Lsm6P62313 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm6P62313 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.4■□□□□ 0.54
Lsm6P62313 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lsm6P62313 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm6P62313 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm6P62313 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm6P62313 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm6P62313 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm6P62313 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm6P62313 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Lsm6P62313 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lsm6P62313 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm6P62313 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Lsm6P62313 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.38■□□□□ 0.53
Lsm6P62313 Gm43566-201ENSMUST00000196851 808 ntBASIC18.38■□□□□ 0.53
Lsm6P62313 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm6P62313 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm6P62313 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lsm6P62313 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.37■□□□□ 0.53
Lsm6P62313 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm6P62313 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm6P62313 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm6P62313 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm6P62313 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.37■□□□□ 0.53
Lsm6P62313 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lsm6P62313 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm6P62313 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lsm6P62313 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Lsm6P62313 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm6P62313 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lsm6P62313 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm6P62313 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm6P62313 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lsm6P62313 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm6P62313 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lsm6P62313 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms